Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   DK43_RS02115 Genome accession   NZ_CP007573
Coordinates   431919..433898 (+) Length   659 a.a.
NCBI ID   WP_022525150.1    Uniprot ID   A0AAI9J8D3
Organism   Streptococcus anginosus strain SA1     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 426919..438898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS02100 (DK43_02180) - 427054..428664 (+) 1611 WP_004224101.1 CTP synthase -
  DK43_RS02105 (DK43_02185) - 428895..429581 (+) 687 WP_004224098.1 phenylalanine--tRNA ligase beta subunit-related protein -
  DK43_RS02110 (DK43_02190) amiA3 429746..431722 (+) 1977 WP_022525151.1 peptide ABC transporter substrate-binding protein Regulator
  DK43_RS02115 (DK43_02195) amiA3 431919..433898 (+) 1980 WP_022525150.1 peptide ABC transporter substrate-binding protein Regulator
  DK43_RS02120 (DK43_02200) amiC 434273..435769 (+) 1497 WP_022525149.1 ABC transporter permease Regulator
  DK43_RS02125 (DK43_02205) amiD 435769..436695 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  DK43_RS02130 (DK43_02210) amiE 436704..437771 (+) 1068 WP_004224088.1 ABC transporter ATP-binding protein Regulator
  DK43_RS02135 (DK43_02215) amiF 437782..438705 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73247.90 Da        Isoelectric Point: 7.3314

>NTDB_id=121194 DK43_RS02115 WP_022525150.1 431919..433898(+) (amiA3) [Streptococcus anginosus strain SA1]
MKKSKIITLAALALLATGTLAACSSSKTGSGNKTFSYVYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWIVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYAADNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKDNIVYTPQDATTYLVATNIDRQSYKHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFGELVKEKLVSYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETNN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFTNPFAWSGNKGNSEIILYKYLELQDEPVTQDQYKKAMTKWN
KERSKSNKKAQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=121194 DK43_RS02115 WP_022525150.1 431919..433898(+) (amiA3) [Streptococcus anginosus strain SA1]
ATGAAGAAAAGTAAAATCATTACCCTAGCAGCGCTAGCCTTGCTTGCAACAGGAACCCTAGCAGCTTGTTCTAGCTCTAA
AACAGGCTCAGGGAACAAAACATTCTCATATGTTTATGAGCAAGATCCAGATAATTTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGCAATGTTATTGACGGACTTTTGGAAAATGACCGTTATGGAAATCTAGTTCCTTCTGTG
GCGAAGGATTGGATCGTCTCTAAAGATGGCTTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
AGGCGAAGAGTATGCAGAGGTTAAGGCACAAGACTTTGTAACGGGCTTAAAATATGCTGCAGACAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAAGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTCGATGATTACACGGTTCAATACACTCTTAATCGACCAGAAAGTTTTTGGAACTCAAAAACAACAATGGGTGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGATCCATCTAGTCTTCTTT
ATAATGGACCATACTTGCTAAAATCTATCACAGCAAAATCATCTGTCGAATTTGCGAAAAATCCAAACTATTGGGATAAG
AAAAATGTGCACATTGATAACATCAAGTTGTCTTACTATGATGGTCAAGATCAGGACAAACTTGCTAAAGGATTTAGCGA
TGGTTCATTTACTAATGCCAAAGTATTTCCAACAAGTCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAGATAACATCG
TTTATACTCCGCAAGATGCAACGACTTACCTAGTAGCTACAAACATTGACCGTCAATCTTACAAACATACTTCAAAGACA
ACAGATGCTCAAAAGACTTCTACTAAGAAAGCTTTGCTAAATAAAGACTTCCGTCAAGCCATTACATTTGCATTTGACCG
CACAGCTTATGCGTCACAAGTAAATGGTAAAGATGGTGCAACGAAGATGCTTCGTAACCTCTTTGTACCACCAACGTTTG
TTCAAACAGATGACAAGAGCTTTGGAGAATTAGTCAAAGAAAAATTAGTCAGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGACGGACTTTACAATCCAACCAAAGCCAAGGAAAAATTAGCCAAAGCTAAAGCGGCGCTTCAAGC
AGACGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCGACTAATAAAGTTCAACGCGTGCAATCAT
TGAAGCAATCAATTGAAAAGAATCTTGGTAAAGAAAATGTTGTAATTGATATTCAACAAATGTCTAAAGATGATGTAAAT
AATATTACTTACTTTGCCGAATCTGCAGCGGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAACCTTCAAGCGGGGAAAGCACTAAGACTTATCTAGGATTTGATGCAGGCA
CGAACAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAGGCTGAAAAAGAAACCAACAAT
ACGAATGCACGTTATGAAAAATATGCTGCAGCCCAAGCTTGGTTGACTGATAATGCTTTGGTTATTCCGACAACAACCTT
GACTGGTCGTCCAATTCTTTCTCGCACAGTGCCATTTACTAATCCATTTGCTTGGTCAGGAAACAAAGGGAATAGTGAAA
TCATTCTATATAAATATCTTGAACTCCAAGATGAGCCTGTTACACAAGATCAGTACAAGAAAGCTATGACTAAATGGAAT
AAAGAGCGATCAAAATCTAATAAAAAAGCTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.364

100

0.615
  amiA3 Streptococcus thermophilus LMG 18311

60.758

100

0.609
  amiA Streptococcus salivarius strain HSISS4

60.455

100

0.605

Multiple sequence alignment