Detailed information NTG0121120

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DK42_RS08170
• Genome accession: NZ_CP007571
• Coordinates: 1640542..1641132 (-)
• Length: 196 a.a.
• NCBI ID: WP_000613483.1
• Uniprot ID: A0AAV3JHA0
• Organism: Streptococcus agalactiae strain GBS2-NM
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1635542..1646132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK42_RS08145 (DK42_08280)	-	1636181..1636945 (-)	765	WP_001185985.1	ATP-binding cassette domain-containing protein	-
DK42_RS08150 (DK42_08285)	-	1636946..1637899 (-)	954	WP_000662328.1	branched-chain amino acid ABC transporter permease	-
DK42_RS08155 (DK42_08290)	-	1637902..1638771 (-)	870	WP_000941396.1	branched-chain amino acid ABC transporter permease	-
DK42_RS08160 (DK42_08295)	-	1638877..1640043 (-)	1167	WP_000415516.1	ABC transporter substrate-binding protein	-
DK42_RS08165 (DK42_08300)	-	1640197..1640442 (-)	246	WP_001041186.1	DUF2129 domain-containing protein	-
DK42_RS08170 (DK42_08305)	clpP	1640542..1641132 (-)	591	WP_000613483.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DK42_RS08175 (DK42_08310)	upp	1641257..1641886 (-)	630	WP_000514490.1	uracil phosphoribosyltransferase	-
DK42_RS08180 (DK42_08315)	-	1641996..1643165 (-)	1170	WP_000634073.1	MalY/PatB family protein	-
DK42_RS08185 (DK42_08320)	-	1643301..1643849 (-)	549	WP_001019794.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
DK42_RS08190 (DK42_08325)	-	1644022..1645374 (-)	1353	WP_000427467.1	APC family permease	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21550.52 Da
• Isoelectric Point: 4.5933

>NTDB_id=121120 DK42_RS08170 WP_000613483.1 1640542..1641132(-) (clpP) [Streptococcus agalactiae strain GBS2-NM]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ

Nucleotide

• Length: 591 bp

>NTDB_id=121120 DK42_RS08170 WP_000613483.1 1640542..1641132(-) (clpP) [Streptococcus agalactiae strain GBS2-NM]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGCTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGATACCATGAAC
TTTATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCGAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGTGGAACAGGCGGAGGCACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATCTACAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus thermophilus LMG 18311	92.347	100	0.923
clpP	Streptococcus thermophilus LMD-9	92.347	100	0.923
clpP	Streptococcus pneumoniae Rx1	92.308	99.49	0.918
clpP	Streptococcus pneumoniae D39	92.308	99.49	0.918
clpP	Streptococcus pneumoniae R6	92.308	99.49	0.918
clpP	Streptococcus pneumoniae TIGR4	92.308	99.49	0.918
clpP	Streptococcus pyogenes JRS4	89.286	100	0.893
clpP	Streptococcus pyogenes MGAS315	89.286	100	0.893
clpP	Streptococcus mutans UA159	88.776	100	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.204	100	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	84.694	100	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.895	96.939	0.561