Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DK41_RS08745 Genome accession   NZ_CP007570
Coordinates   1784970..1785125 (-) Length   51 a.a.
NCBI ID   WP_041330050.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS1-NY     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1779970..1790125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK41_RS08730 (DK41_08835) - 1780619..1781827 (-) 1209 WP_000659000.1 NAD(P)/FAD-dependent oxidoreductase -
  DK41_RS08735 (DK41_08840) - 1781840..1782739 (-) 900 WP_000174549.1 prenyltransferase -
  DK41_RS08740 (DK41_08845) - 1783147..1783911 (-) 765 WP_041330048.1 hypothetical protein -
  DK41_RS08745 (DK41_08850) prx 1784970..1785125 (-) 156 WP_041330050.1 hypothetical protein Regulator
  DK41_RS08750 (DK41_08855) - 1785293..1785823 (+) 531 WP_000868850.1 hypothetical protein -
  DK41_RS08755 (DK41_08860) - 1785832..1786215 (+) 384 WP_017827922.1 hypothetical protein -
  DK41_RS08760 (DK41_08865) - 1786199..1787458 (+) 1260 WP_001088060.1 helicase-related protein -
  DK41_RS08765 (DK41_08870) - 1787442..1788713 (+) 1272 WP_000860391.1 DUF3440 domain-containing protein -
  DK41_RS08770 (DK41_08875) - 1788697..1789212 (+) 516 WP_001193040.1 ParB/RepB/Spo0J family partition protein -
  DK41_RS08775 (DK41_08880) - 1789250..1789453 (+) 204 WP_000138374.1 hypothetical protein -
  DK41_RS08780 (DK41_08885) - 1789621..1789950 (+) 330 WP_000695684.1 hypothetical protein -

Sequence

Protein


Download         Length: 51 a.a.        Molecular weight: 5814.65 Da        Isoelectric Point: 4.6286

>NTDB_id=121071 DK41_RS08745 WP_041330050.1 1784970..1785125(-) (prx) [Streptococcus agalactiae strain GBS1-NY]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEKVRDDEVVAVESV

Nucleotide


Download         Length: 156 bp        

>NTDB_id=121071 DK41_RS08745 WP_041330050.1 1784970..1785125(-) (prx) [Streptococcus agalactiae strain GBS1-NY]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAAGTTGTGGCAGTAGAGAGTGTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

95.349

84.314

0.804
  prx Streptococcus pyogenes MGAS8232

72.549

100

0.725
  prx Streptococcus pyogenes MGAS315

70.588

100

0.706
  prx Streptococcus pyogenes MGAS315

70.588

100

0.706
  prx Streptococcus pyogenes MGAS315

80.488

80.392

0.647
  prx Streptococcus pyogenes MGAS315

64.706

100

0.647
  prx Streptococcus pyogenes MGAS315

73.81

82.353

0.608

Multiple sequence alignment