Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DK41_RS03200 Genome accession   NZ_CP007570
Coordinates   587019..587207 (+) Length   62 a.a.
NCBI ID   WP_000027835.1    Uniprot ID   A0AAV3JNT7
Organism   Streptococcus agalactiae strain GBS1-NY     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 582019..592207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK41_RS03175 (DK41_03225) - 582458..583834 (+) 1377 WP_000594351.1 FtsX-like permease family protein -
  DK41_RS03180 (DK41_03230) - 583931..584584 (+) 654 WP_000699093.1 response regulator transcription factor -
  DK41_RS03185 (DK41_03235) - 584581..585900 (+) 1320 WP_000734169.1 HAMP domain-containing sensor histidine kinase -
  DK41_RS03190 (DK41_03240) - 585952..586599 (-) 648 Protein_545 IS3 family transposase -
  DK41_RS03195 (DK41_03245) - 586777..586977 (+) 201 WP_000076708.1 CsbD family protein -
  DK41_RS03200 prx 587019..587207 (+) 189 WP_000027835.1 hypothetical protein Regulator
  DK41_RS03205 (DK41_03250) - 587424..588875 (-) 1452 WP_041330030.1 IS1182 family transposase -
  DK41_RS03210 (DK41_03255) - 589196..590401 (+) 1206 WP_000078930.1 FtsW/RodA/SpoVE family cell cycle protein -
  DK41_RS03215 (DK41_03260) - 590571..591704 (+) 1134 WP_000564843.1 ISAs1-like element IS1548 family transposase -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7180.25 Da        Isoelectric Point: 4.7815

>NTDB_id=121048 DK41_RS03200 WP_000027835.1 587019..587207(+) (prx) [Streptococcus agalactiae strain GBS1-NY]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=121048 DK41_RS03200 WP_000027835.1 587019..587207(+) (prx) [Streptococcus agalactiae strain GBS1-NY]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

72.222

87.097

0.629
  prx Streptococcus pyogenes MGAS8232

69.091

88.71

0.613
  prx Streptococcus pyogenes MGAS315

66.667

87.097

0.581
  prx Streptococcus pyogenes MGAS315

85

64.516

0.548
  prx Streptococcus pyogenes MGAS315

61.818

88.71

0.548
  prx Streptococcus pyogenes MGAS315

74.359

62.903

0.468
  prx Streptococcus pyogenes MGAS315

78.378

59.677

0.468

Multiple sequence alignment