Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   STAB1101_RS04660 Genome accession   NZ_CP007240
Coordinates   939959..940147 (-) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A5S4TJS4
Organism   Streptococcus pyogenes strain 7F7     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 934959..945147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB1101_RS04640 (STAB1101_04640) - 936759..937130 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  STAB1101_RS04645 (STAB1101_04645) - 937130..937828 (+) 699 WP_002992425.1 ABC transporter ATP-binding protein -
  STAB1101_RS04650 (STAB1101_04650) - 937838..938623 (+) 786 WP_002984433.1 hypothetical protein -
  STAB1101_RS04655 (STAB1101_04655) - 938754..939368 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  STAB1101_RS04660 (STAB1101_04660) prx 939959..940147 (-) 189 WP_011054546.1 hypothetical protein Regulator
  STAB1101_RS04665 (STAB1101_04665) spel 940262..941050 (-) 789 WP_020833516.1 streptococcal pyrogenic exotoxin SpeL -
  STAB1101_RS04670 (STAB1101_04670) spem 941332..942045 (-) 714 WP_038431384.1 streptococcal pyrogenic exotoxin SpeM -
  STAB1101_RS04675 (STAB1101_04675) - 942349..943215 (-) 867 WP_038431386.1 DUF334 domain-containing protein -
  STAB1101_RS04680 (STAB1101_04680) - 943203..943727 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  STAB1101_RS04685 (STAB1101_04685) - 943867..945075 (-) 1209 WP_038431388.1 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=118037 STAB1101_RS04660 WP_011054546.1 939959..940147(-) (prx) [Streptococcus pyogenes strain 7F7]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=118037 STAB1101_RS04660 WP_011054546.1 939959..940147(-) (prx) [Streptococcus pyogenes strain 7F7]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806
  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79
  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742
  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516

Multiple sequence alignment