Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ACLV7A_RS05850 Genome accession   NZ_OZ217344
Coordinates   1196075..1196725 (-) Length   216 a.a.
NCBI ID   WP_411863847.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis E22     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1191075..1201725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7A_RS05830 (SMIE22_11520) - 1191690..1192874 (-) 1185 WP_411863844.1 hypothetical protein -
  ACLV7A_RS05835 (SMIE22_11530) - 1192878..1193465 (-) 588 WP_411863845.1 ATP-binding cassette domain-containing protein -
  ACLV7A_RS05840 - 1193498..1193693 (-) 196 Protein_1108 hypothetical protein -
  ACLV7A_RS05845 (SMIE22_11540) comEC/celB 1193851..1196091 (-) 2241 WP_411863846.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7A_RS05850 (SMIE22_11550) comEA/celA/cilE 1196075..1196725 (-) 651 WP_411863847.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7A_RS05855 (SMIE22_11560) - 1196792..1197361 (-) 570 WP_411863848.1 GNAT family N-acetyltransferase -
  ACLV7A_RS05860 (SMIE22_11570) - 1197468..1198472 (-) 1005 WP_411863849.1 PhoH family protein -
  ACLV7A_RS05865 (SMIE22_11580) - 1198557..1198772 (-) 216 WP_095726103.1 YozE family protein -
  ACLV7A_RS05870 (SMIE22_11590) cvfB 1198781..1199635 (-) 855 WP_001095456.1 RNA-binding virulence regulatory protein CvfB -
  ACLV7A_RS05875 (SMIE22_11600) frr 1199695..1200252 (-) 558 WP_001262225.1 ribosome recycling factor -
  ACLV7A_RS05880 (SMIE22_11610) pyrH 1200261..1200998 (-) 738 WP_000002996.1 UMP kinase -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23298.54 Da        Isoelectric Point: 5.5209

>NTDB_id=1170293 ACLV7A_RS05850 WP_411863847.1 1196075..1196725(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis E22]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPDSQTPVKETNLQAEVAAVSKDSVSEKEVKKEEKEEPFEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAASQHTSSGTASSTSKDKKINLNKA
SLEELKQVKGLGGKRAQDIIDYREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1170293 ACLV7A_RS05850 WP_411863847.1 1196075..1196725(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis E22]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATTGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGATTCACAAACACCTGTCAAGGAAACGAATTTGCAGGCAGAAGTTGCAGCTGTTTCCAAGGATT
CGGTATCCGAAAAGGAAGTGAAGAAGGAAGAAAAGGAAGAACCCTTTGAACAAGACCTAATCACAGTAGATGTTAAGGGG
GCTGTTAAATCGCCAGGGATTTATGATTTGCCGGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGATAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCCACTAAGGGAG
AAGAAGCAGCTAGTCAACATACTAGTTCGGGGACAGCTTCTTCAACAAGCAAGGACAAGAAGATCAATCTCAACAAGGCC
AGTCTGGAAGAGCTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGATATTATTGACTATCGTGAGGCAAATGG
GAAATTTAAGTCGGTTGATGAACTCAAGAAGGTCTCTGGCATTGGCGCCAAGACTATAGAAAAGTTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(152-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

94.907

100

0.949

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

94.444

100

0.944

  comEA/celA/cilE Streptococcus pneumoniae D39

93.519

100

0.935

  comEA/celA/cilE Streptococcus pneumoniae R6

93.519

100

0.935

  comEA/celA/cilE Streptococcus pneumoniae Rx1

93.519

100

0.935

  comEA/celA/cilE Streptococcus mitis SK321

92.593

100

0.926

  comEA Lactococcus lactis subsp. cremoris KW2

42.342

100

0.435

  comEA Latilactobacillus sakei subsp. sakei 23K

34.615

100

0.375


Multiple sequence alignment