Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   ACLV7Z_RS10140 Genome accession   NZ_OZ217343
Coordinates   2031523..2033676 (+) Length   717 a.a.
NCBI ID   WP_218773990.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 2026523..2038676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS10110 (SMIG22_20000) - 2027094..2028080 (-) 987 WP_166730973.1 rhodanese-related sulfurtransferase -
  ACLV7Z_RS10115 (SMIG22_20010) - 2028276..2029469 (-) 1194 WP_218773991.1 OFA family MFS transporter -
  ACLV7Z_RS10120 (SMIG22_20020) blpZ 2030008..2030256 (-) 249 WP_112444786.1 immunity protein BlpZ -
  ACLV7Z_RS10125 (SMIG22_20030) - 2030336..2030554 (-) 219 WP_173213201.1 hypothetical protein -
  ACLV7Z_RS10130 (SMIG22_20040) - 2030560..2030934 (-) 375 WP_173213199.1 immunity protein -
  ACLV7Z_RS10135 (SMIG22_20050) - 2030986..2031213 (-) 228 WP_164226314.1 Blp family class II bacteriocin -
  ACLV7Z_RS10140 (SMIG22_20060) comA/nlmT 2031523..2033676 (+) 2154 WP_218773990.1 peptide cleavage/export ABC transporter BlpA Regulator
  ACLV7Z_RS10145 (SMIG22_20070) - 2033687..2035048 (+) 1362 WP_218773989.1 bacteriocin secretion accessory protein -
  ACLV7Z_RS10150 (SMIG22_20080) blpC 2035105..2035245 (+) 141 WP_112444774.1 quorum-sensing system pheromone BlpC -
  ACLV7Z_RS10155 (SMIG22_20090) - 2035352..2036686 (-) 1335 WP_218757325.1 sensor histidine kinase -
  ACLV7Z_RS10160 (SMIG22_20100) comE/blpR 2036690..2037439 (-) 750 WP_173253425.1 response regulator transcription factor Regulator
  ACLV7Z_RS10165 (SMIG22_20110) - 2037436..2037783 (-) 348 WP_218757326.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
  ACLV7Z_RS10170 (SMIG22_20120) - 2037967..2038353 (+) 387 WP_225904702.1 hypothetical protein -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80712.78 Da        Isoelectric Point: 7.6964

>NTDB_id=1170233 ACLV7Z_RS10140 WP_218773990.1 2031523..2033676(+) (comA/nlmT) [Streptococcus mitis isolate S. mitis G22]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFSEWTGVAIFLAPKPSYQPHKDKKNDLLSFLPL
IFKQKSLIAYIVLSSLLVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMGFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATHRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLISIPMYMV
IIFSFMKPFEKMNHDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKL
VLNILILWFGAQLVMSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQAPENPVHSHFL
MGDIEFDDLSYKYGFGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHI
NYLPQQAYIFNGSILENLTLGGNHMISQKDILRACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKKVIDNLMSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=1170233 ACLV7Z_RS10140 WP_218773990.1 2031523..2033676(+) (comA/nlmT) [Streptococcus mitis isolate S. mitis G22]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCTAGAGACTGCGGTGTTGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGAACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACTCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTCTGAATGGACTGGAG
TAGCTATTTTTCTAGCTCCCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGATCTACTAAGCTTCCTTCCTCTG
ATTTTCAAGCAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACGATTATCAATATAGGTGGTTCTTA
TTATCTCCAAGGAATCTTGGATGAATACATCCCAAATCAGATGAAATCAACTTTAGGAATCATCTCAGTTGGTCTGGTTA
TCACCTATATCCTCCAACAAGTCATGGGCTTCTCCAGAGATTATCTCCTAACTGTTCTGAGTCAGAGATTAAGCATTGAT
GTAATTTTGTCCTATATTCGCCATATTTTTGAACTTCCTATGTCTTTCTTTGCGACACATCGTACAGGAGAAATCATTTC
ACGGTTCACAGATGCCAACTCTATTATAGATGCCTTGGCTTCTACCATTCTCTCTCTTTTTCTGGATGTTTCTATTCTGA
TTCTTGTAGGGGGAGTCTTACTGGCACAAAACCCTAATCTCTTCCTTCTTTCTCTTATTTCCATTCCTATGTACATGGTC
ATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTCATGCAAAGTAATTCTATGGTTAGTTCTGCCAT
TATCGAAGATATCAACGGGATTGAAACTATCAAGTCGCTCACGAGTGAAGAAAATCGCTATCAAAATATAGACAGCGAAT
TTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTTTACAAACGAGTTTAAAGCAGGGAACAAAATTA
GTTCTGAATATCCTTATCCTATGGTTTGGCGCTCAATTAGTCATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTT
TAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATATTATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCG
CTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAATTCCAAGCCCCAGAAAACCCTGTTCATTCACATTTTTTG
ATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGTTTTGGACGAGATACCTTAACAGATATTAATCTCACGAT
TAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTCTGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCT
TTGAACCCTACAAAGGACATATTTCCATCAATCATCAGGATATTAAAAACATTGATAAAAAAGTTTTGCGCCGCCATATC
AATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATCTTGGAAAACTTAACCTTGGGTGGTAATCATATGATTAG
CCAAAAAGATATTCTAAGAGCTTGTGAATTAGCTGAAATCCGTCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTC
AGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAAAAGCAACGAATAGCCCTCGCTCGTGCTCTTTTAACTAAAGCTCCT
GTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTGACTGAGAAAAAAGTTATAGATAATCTTATGTCCCTAAC
TGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACCAACCGTGTCATTGTTCTCGACCAGGGGA
AAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAGGCGCAAGGCTTCTACCATCATCTATTCAATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

71.608

99.721

0.714

  comA Streptococcus mitis NCTC 12261

66.199

99.442

0.658

  comA Streptococcus pneumoniae Rx1

65.638

99.442

0.653

  comA Streptococcus pneumoniae R6

65.638

99.442

0.653

  comA Streptococcus pneumoniae D39

65.638

99.442

0.653

  comA Streptococcus mitis SK321

65.638

99.442

0.653

  comA Streptococcus gordonii str. Challis substr. CH1

64.903

100

0.65

  comA Streptococcus pneumoniae TIGR4

65.358

99.442

0.65


Multiple sequence alignment