Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ACLV7Q_RS06295 Genome accession   NZ_OZ217341
Coordinates   1274136..1274786 (-) Length   216 a.a.
NCBI ID   WP_016398663.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1269136..1279786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS06275 (SMIC22_12310) - 1269740..1270921 (-) 1182 WP_218757803.1 hypothetical protein -
  ACLV7Q_RS06280 (SMIC22_12320) - 1270925..1271512 (-) 588 WP_173252988.1 ATP-binding cassette domain-containing protein -
  ACLV7Q_RS06285 - 1271545..1271733 (-) 189 Protein_1191 hypothetical protein -
  ACLV7Q_RS06290 (SMIC22_12330) comEC/celB 1271912..1274152 (-) 2241 WP_218757802.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7Q_RS06295 (SMIC22_12340) comEA/celA/cilE 1274136..1274786 (-) 651 WP_016398663.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7Q_RS06300 (SMIC22_12350) - 1274854..1275423 (-) 570 WP_218757801.1 GNAT family N-acetyltransferase -
  ACLV7Q_RS06305 (SMIC22_12360) - 1275530..1276534 (-) 1005 WP_218757800.1 PhoH family protein -
  ACLV7Q_RS06310 (SMIC22_12370) - 1276620..1276835 (-) 216 WP_001232084.1 YozE family protein -
  ACLV7Q_RS06315 (SMIC22_12380) cvfB 1276844..1277698 (-) 855 WP_001095445.1 RNA-binding virulence regulatory protein CvfB -
  ACLV7Q_RS06320 (SMIC22_12390) frr 1277758..1278315 (-) 558 WP_001262225.1 ribosome recycling factor -
  ACLV7Q_RS06325 (SMIC22_12400) pyrH 1278336..1279061 (-) 726 WP_173254341.1 UMP kinase -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23203.52 Da        Isoelectric Point: 5.5512

>NTDB_id=1170047 ACLV7Q_RS06295 WP_016398663.1 1274136..1274786(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis C22]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPTPQTPVKETNLQAEVAAISKDSSTEKDVKKEEKEEPVEQDLITVDVKG
AVKAPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAASQQAGPGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDYRETNGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1170047 ACLV7Q_RS06295 WP_016398663.1 1274136..1274786(-) (comEA/celA/cilE) [Streptococcus mitis isolate S. mitis C22]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATTGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAGCCAACTCCACAAACACCTGTAAAAGAAACGAATTTACAGGCAGAAGTCGCAGCTATTTCCAAGGACT
CATCGACCGAAAAGGATGTGAAGAAGGAAGAAAAGGAAGAACCGGTTGAACAAGATCTAATCACAGTAGATGTAAAAGGC
GCTGTTAAAGCACCTGGAATTTATGATTTGCCGGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGATAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCCACTAAGGGAG
AAGAGGCAGCTAGTCAGCAGGCAGGTCCAGGGACGGCTTCTTCGACGAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAAGGACTGGGAGGAAAACGAGCTCAGGATATTATAGACTACCGTGAAACGAATGG
CAAATTCAAGTCGGTTGATGAACTTAAGAAGGTCTCTGGCATTGGTGCTAAAACGATAGAAAAGCTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(151-214)

(76-126)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.37

100

0.954

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

94.907

100

0.949

  comEA/celA/cilE Streptococcus pneumoniae D39

92.593

100

0.926

  comEA/celA/cilE Streptococcus mitis SK321

92.593

100

0.926

  comEA/celA/cilE Streptococcus pneumoniae R6

92.593

100

0.926

  comEA/celA/cilE Streptococcus pneumoniae Rx1

92.593

100

0.926

  comEA Lactococcus lactis subsp. cremoris KW2

40.889

100

0.426

  comEA Latilactobacillus sakei subsp. sakei 23K

35.193

100

0.38


Multiple sequence alignment