Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ACLV7Q_RS06290 Genome accession   NZ_OZ217341
Coordinates   1271912..1274152 (-) Length   746 a.a.
NCBI ID   WP_218757802.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1266912..1279152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS06255 (SMIC22_12260) - 1267820..1268200 (-) 381 WP_000157153.1 VOC family protein -
  ACLV7Q_RS06260 (SMIC22_12270) rplT 1268259..1268618 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  ACLV7Q_RS06265 (SMIC22_12280) rpmI 1268670..1268870 (-) 201 WP_001125943.1 50S ribosomal protein L35 -
  ACLV7Q_RS06270 (SMIC22_12290) infC 1268903..1269433 (-) 531 WP_000848180.1 translation initiation factor IF-3 -
  ACLV7Q_RS06275 (SMIC22_12310) - 1269740..1270921 (-) 1182 WP_218757803.1 hypothetical protein -
  ACLV7Q_RS06280 (SMIC22_12320) - 1270925..1271512 (-) 588 WP_173252988.1 ATP-binding cassette domain-containing protein -
  ACLV7Q_RS06285 - 1271545..1271733 (-) 189 Protein_1191 hypothetical protein -
  ACLV7Q_RS06290 (SMIC22_12330) comEC/celB 1271912..1274152 (-) 2241 WP_218757802.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7Q_RS06295 (SMIC22_12340) comEA/celA/cilE 1274136..1274786 (-) 651 WP_016398663.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7Q_RS06300 (SMIC22_12350) - 1274854..1275423 (-) 570 WP_218757801.1 GNAT family N-acetyltransferase -
  ACLV7Q_RS06305 (SMIC22_12360) - 1275530..1276534 (-) 1005 WP_218757800.1 PhoH family protein -
  ACLV7Q_RS06310 (SMIC22_12370) - 1276620..1276835 (-) 216 WP_001232084.1 YozE family protein -
  ACLV7Q_RS06315 (SMIC22_12380) cvfB 1276844..1277698 (-) 855 WP_001095445.1 RNA-binding virulence regulatory protein CvfB -
  ACLV7Q_RS06320 (SMIC22_12390) frr 1277758..1278315 (-) 558 WP_001262225.1 ribosome recycling factor -
  ACLV7Q_RS06325 (SMIC22_12400) pyrH 1278336..1279061 (-) 726 WP_173254341.1 UMP kinase -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84372.69 Da        Isoelectric Point: 9.3035

>NTDB_id=1170046 ACLV7Q_RS06290 WP_218757802.1 1271912..1274152(-) (comEC/celB) [Streptococcus mitis isolate S. mitis C22]
MLQWIKNFSIPLIYLSFLLLWLYYAIFSSSYLALLGFVFLLVCLFIQFPWKSAGRVLVICGVFGFWFLFQNWQQSQASQN
LADSVERVRILPDTIKVNGDSLSFRGKADGRIFQVYYKVQSEGEKEAFQALTALHDLELEGKLSEPEGQRNFGGFDYQAY
LKTQGIYQTLNIKKIQSLQKVGSWDIGENLSSLRRKAVVWIKTHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDGFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLVQHGVKGLDNFALTVLVLFIV
MPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESLVISLGILPILSFYFAEFQPCSILLTFVFSFLFDLVFLPLLSI
LFALSFLYPVIQLNFIFEWLEGMIRLVSQVASRPLVFGQPNAWLLILLLISLALVYDLRKNIKMLTVLSLLITGLFFLTK
NPLENEITMLDAGQGESIFLRDVTGKTILIDVGGKAESSKKIEKWQEKTTTSNAQRSLIPYLKSRGVSKIDQLILTNTDK
EHIGDLLEVTKAFHVGEILVSKGSLKQKEFVAELQTAQTKVRSVTVGENLPIFGSQLEVLSPRKMGDGGHEDSLVLYGKL
LDKHFLFTENLEEKGEKDLLKHYPDLEVDVLKASQHGSKKSSSSAFLEKLKPELTLISVGKNNRTKLPHQETLTRLETIN
SKVYRTDQQGAIRFKGWNSWKIESVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=1170046 ACLV7Q_RS06290 WP_218757802.1 1271912..1274152(-) (comEC/celB) [Streptococcus mitis isolate S. mitis C22]
ATGTTACAGTGGATTAAGAATTTCTCTATTCCCCTAATTTACCTGAGTTTTCTGTTACTTTGGCTTTACTACGCCATTTT
CTCATCATCTTATCTCGCATTGCTAGGTTTTGTTTTTCTGCTAGTCTGTCTCTTTATTCAATTTCCTTGGAAATCAGCAG
GCAGAGTTCTAGTGATTTGTGGAGTCTTTGGCTTTTGGTTTCTGTTTCAAAATTGGCAACAGAGTCAAGCGAGTCAAAAT
TTGGCGGATTCTGTTGAAAGGGTACGGATTTTGCCTGATACTATTAAGGTTAATGGTGATAGTCTATCCTTTCGGGGCAA
GGCCGATGGCCGCATTTTTCAAGTCTATTATAAAGTCCAGTCTGAGGGGGAAAAAGAAGCCTTCCAAGCTTTAACAGCTC
TTCATGACTTGGAACTAGAAGGGAAGCTTTCGGAGCCAGAAGGGCAGAGAAATTTTGGTGGATTTGACTATCAAGCCTAT
CTGAAAACTCAGGGAATTTACCAAACTCTCAATATCAAAAAAATCCAGTCACTTCAAAAGGTTGGCAGTTGGGATATAGG
TGAAAACTTGTCCAGTTTACGTCGAAAGGCTGTGGTTTGGATCAAGACGCACTTTCCAGATCCTATGCGCAATTACATGA
CGGGGCTTCTATTAGGACATCTGGATACAGACTTTGAGGAGATGAATGAGCTTTATTCTAGTCTAGGAATTATCCACCTA
TTTGCCTTGTCGGGTATGCAGGTAGGCTTTTTCATGGATGGATTTAAGAAACTTCTCTTGCGATTGGGCTTGACCCAAGA
AAAGTTGAAATGGCTGACTTATCCCTTTTCCCTTATCTATGCAGGTCTGACAGGATTTTCAGCCTCGGTCATTCGCAGTC
TTTTGCAAAAATTACTGGTCCAACATGGTGTTAAGGGCTTGGATAATTTTGCCTTGACGGTGCTTGTCCTCTTTATTGTC
ATGCCAAACTTTTTCTTGACAGCAGGAGGAGTTTTGTCCTGTGCTTATGCTTTTATCTTGACCATGACCAGCAAAGAAGG
GGAGGGGCTCAAGGCTGTTGCTAGAGAAAGTCTAGTCATCTCCTTGGGTATATTGCCCATTCTGTCCTTCTATTTTGCGG
AATTTCAACCTTGCTCCATCCTTTTGACCTTTGTCTTTTCCTTTCTATTTGATTTGGTCTTCTTACCGCTCTTGTCTATC
TTATTTGCCCTTTCCTTTCTCTATCCAGTCATTCAGCTGAATTTTATTTTTGAATGGTTGGAGGGGATGATTCGCTTGGT
ATCACAGGTGGCAAGTAGACCGCTTGTCTTTGGACAACCTAATGCGTGGCTTTTAATCTTGTTGTTAATTTCCTTGGCTT
TGGTCTATGATTTGAGGAAAAACATTAAAATGTTAACGGTATTGAGCTTATTGATTACAGGTCTCTTTTTCCTGACCAAG
AATCCACTAGAAAATGAAATCACCATGCTGGATGCGGGGCAAGGCGAAAGCATTTTCCTACGGGATGTAACTGGGAAAAC
CATTCTCATAGATGTAGGCGGCAAGGCAGAGTCTAGTAAGAAAATAGAAAAATGGCAAGAAAAGACGACGACCAGCAATG
CCCAGAGAAGCTTGATACCCTATCTTAAAAGTCGAGGAGTGAGCAAGATTGACCAGCTGATTTTGACAAACACGGACAAG
GAGCATATTGGAGATTTGTTGGAGGTGACCAAGGCTTTCCATGTAGGCGAAATTTTAGTATCAAAAGGCAGTCTGAAACA
GAAGGAATTTGTGGCAGAACTACAGACTGCTCAAACCAAGGTGCGTAGTGTGACAGTAGGGGAGAACTTGCCAATTTTTG
GAAGTCAGTTAGAAGTCCTATCTCCAAGGAAAATGGGAGATGGAGGTCATGAAGATTCCCTGGTTCTTTATGGGAAACTC
TTGGATAAGCACTTCCTCTTCACAGAAAACTTGGAGGAGAAAGGAGAGAAGGACTTGTTGAAGCACTATCCTGACCTAGA
GGTGGATGTTTTGAAAGCTAGCCAACATGGCTCTAAAAAATCATCAAGTTCAGCCTTTCTAGAAAAACTCAAACCAGAGC
TTACTCTTATCTCAGTTGGAAAGAATAATCGAACGAAACTCCCCCATCAGGAAACTTTGACACGACTGGAAACGATCAAT
AGCAAAGTATATCGAACTGATCAGCAAGGAGCTATACGCTTTAAGGGTTGGAATAGTTGGAAGATTGAAAGCGTTCGATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

93.968

100

0.94

  comEC/celB Streptococcus mitis NCTC 12261

93.423

99.866

0.933

  comEC/celB Streptococcus pneumoniae Rx1

92.493

100

0.925

  comEC/celB Streptococcus pneumoniae D39

92.493

100

0.925

  comEC/celB Streptococcus pneumoniae R6

92.493

100

0.925

  comEC/celB Streptococcus pneumoniae TIGR4

92.493

100

0.925

  comEC Lactococcus lactis subsp. cremoris KW2

45.074

99.33

0.448


Multiple sequence alignment