Detailed information NTG1165693

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB3Y84_RS02925
• Genome accession: NZ_OZ061291
• Coordinates: 578436..579035 (-)
• Length: 199 a.a.
• NCBI ID: WP_003129593.1
• Uniprot ID: -
• Organism: Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 573436..584035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Y84_RS02915	acnA	574566..577112 (+)	2547	WP_098383617.1	aconitate hydratase AcnA	-
AB3Y84_RS02920	icd	577133..578371 (+)	1239	WP_367293560.1	NADP-dependent isocitrate dehydrogenase	-
AB3Y84_RS02925	clpP	578436..579035 (-)	600	WP_003129593.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB3Y84_RS02930	-	579232..579762 (+)	531	WP_179884461.1	hypothetical protein	-
AB3Y84_RS02935	spx	579922..580320 (+)	399	WP_003129597.1	transcriptional regulator Spx	-
AB3Y84_RS02940	-	580703..581866 (-)	1164	WP_367293561.1	DUF998 domain-containing protein	-

Sequence

Protein

• Length: 199 a.a.
• Molecular weight: 22082.24 Da
• Isoelectric Point: 4.7423

>NTDB_id=1165693 AB3Y84_RS02925 WP_003129593.1 578436..579035(-) (clpP) [Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553]
MGYLVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVD
TMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGQGTQQTDMAIVAEQLLKTRKRLEQILADN
SNRSLEQIHKDAERDHWMDAKETLEYGFIDEIMENNSLK

Nucleotide

• Length: 600 bp

>NTDB_id=1165693 AB3Y84_RS02925 WP_003129593.1 578436..579035(-) (clpP) [Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553]
ATGGGTTATTTAGTACCTACCGTTATTGAACAATCAAGCCGTGGCGAACGTGCTTATGATATTTATTCACGACTTTTAAA
AGACCGCATTATCATGCTGACAGGACCTGTTGAAGATGGAATGGCAAATTCTATCATTGCTCAACTTCTTTTCTTGGATG
CACAAGATAACACTAAAGATATTTATCTCTACGTAAATACACCTGGTGGTTCTGTATCTGCTGGTCTTGCCATTGTTGAT
ACAATGAATTTTATCAAATCAGATGTTCAAACTATCGTTATGGGAATGGCTGCCTCTATGGGAACAATCATTGCTTCAAG
CGGAACAAAAGGCAAACGATTCATGTTGCCAAATGCTGAATATCTTATTCACCAACCAATGGGTGGTACAGGTCAAGGCA
CTCAACAAACTGATATGGCTATTGTTGCTGAGCAACTTTTGAAAACTCGTAAACGTTTGGAACAAATTCTTGCTGATAAT
TCCAACCGTTCACTTGAACAAATTCACAAAGATGCCGAACGTGACCATTGGATGGATGCCAAAGAAACTTTGGAATATGG
TTTCATTGATGAAATTATGGAAAATAATTCCTTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	100	100	1
clpP	Lactococcus lactis subsp. cremoris KW2	99.497	100	0.995
clpP	Streptococcus mutans UA159	87.755	98.492	0.864
clpP	Streptococcus thermophilus LMD-9	87.245	98.492	0.859
clpP	Streptococcus thermophilus LMG 18311	87.245	98.492	0.859
clpP	Streptococcus pyogenes MGAS315	86.224	98.492	0.849
clpP	Streptococcus pyogenes JRS4	86.224	98.492	0.849
clpP	Streptococcus pneumoniae D39	85.128	97.99	0.834
clpP	Streptococcus pneumoniae TIGR4	85.128	97.99	0.834
clpP	Streptococcus pneumoniae R6	85.128	97.99	0.834
clpP	Streptococcus pneumoniae Rx1	85.128	97.99	0.834
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.477	96.985	0.548
clpP	Bacillus subtilis subsp. subtilis str. 168	57.368	95.477	0.548