Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   QOR57_RS03185 Genome accession   NZ_OX461088
Coordinates   562352..562531 (+) Length   59 a.a.
NCBI ID   WP_000965651.1    Uniprot ID   A0AB38VMU0
Organism   Streptococcus agalactiae isolate MRI Z2-338     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 521703..564110 562352..562531 within 0


Gene organization within MGE regions


Location: 521703..564110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR57_RS02910 - 521721..522560 (+) 840 WP_001035227.1 SGNH/GDSL hydrolase family protein -
  QOR57_RS02915 - 522535..523137 (+) 603 WP_017647077.1 YpmS family protein -
  QOR57_RS02920 - 523240..523515 (+) 276 WP_001284634.1 HU family DNA-binding protein -
  QOR57_RS02925 - 523603..524745 (-) 1143 WP_000269473.1 site-specific integrase -
  QOR57_RS02930 - 524860..525411 (-) 552 WP_000353930.1 hypothetical protein -
  QOR57_RS02935 - 525429..525815 (-) 387 WP_000151182.1 ImmA/IrrE family metallo-endopeptidase -
  QOR57_RS02940 - 525819..526166 (-) 348 WP_000484457.1 helix-turn-helix transcriptional regulator -
  QOR57_RS02945 - 526657..527445 (-) 789 WP_000092750.1 hypothetical protein -
  QOR57_RS02950 - 527496..527687 (+) 192 WP_001112862.1 hypothetical protein -
  QOR57_RS02955 - 527768..528079 (+) 312 WP_001123482.1 hypothetical protein -
  QOR57_RS02960 - 528084..528233 (+) 150 WP_000732608.1 hypothetical protein -
  QOR57_RS02965 - 528227..528454 (+) 228 WP_000910901.1 hypothetical protein -
  QOR57_RS02970 - 528447..528677 (+) 231 WP_225045564.1 hypothetical protein -
  QOR57_RS02975 - 528661..529980 (+) 1320 WP_000156426.1 AAA family ATPase -
  QOR57_RS02980 - 529995..531067 (+) 1073 Protein_503 ATP-binding protein -
  QOR57_RS02985 - 531163..531786 (+) 624 WP_270982287.1 hypothetical protein -
  QOR57_RS02990 - 531786..532394 (+) 609 WP_001870729.1 hypothetical protein -
  QOR57_RS02995 - 532400..533983 (+) 1584 WP_032456395.1 DEAD/DEAH box helicase -
  QOR57_RS03000 - 533992..534189 (+) 198 WP_000427885.1 hypothetical protein -
  QOR57_RS03005 - 534182..534433 (-) 252 WP_001114109.1 hypothetical protein -
  QOR57_RS03010 - 534504..536783 (+) 2280 WP_000829573.1 AAA family ATPase -
  QOR57_RS03015 - 537153..537386 (+) 234 WP_000666343.1 hypothetical protein -
  QOR57_RS03020 - 537376..537774 (+) 399 WP_000151204.1 RusA family crossover junction endodeoxyribonuclease -
  QOR57_RS03025 - 537771..537986 (+) 216 WP_000687319.1 hypothetical protein -
  QOR57_RS03030 - 537983..538219 (+) 237 WP_000145465.1 DUF3310 domain-containing protein -
  QOR57_RS03035 - 538216..538446 (+) 231 WP_001005355.1 hypothetical protein -
  QOR57_RS03040 - 538449..538781 (+) 333 WP_000052302.1 hypothetical protein -
  QOR57_RS03045 - 538859..539272 (+) 414 WP_000041038.1 transcriptional regulator -
  QOR57_RS03050 - 539393..539824 (+) 432 WP_000041103.1 terminase small subunit -
  QOR57_RS03055 - 539814..541094 (+) 1281 WP_000208745.1 PBSX family phage terminase large subunit -
  QOR57_RS03060 - 541109..542638 (+) 1530 WP_000462948.1 phage portal protein -
  QOR57_RS03065 - 542598..544046 (+) 1449 WP_032457277.1 phage head morphogenesis protein -
  QOR57_RS10300 - 544074..544262 (+) 189 WP_025194292.1 hypothetical protein -
  QOR57_RS03070 - 544267..544470 (+) 204 WP_001042286.1 hypothetical protein -
  QOR57_RS03075 - 544613..545182 (+) 570 WP_000797011.1 DUF4355 domain-containing protein -
  QOR57_RS03080 - 545201..546097 (+) 897 WP_000818573.1 hypothetical protein -
  QOR57_RS03085 - 546103..546459 (+) 357 WP_000356705.1 phage head-tail connector protein -
  QOR57_RS03090 - 546470..546748 (+) 279 WP_000639437.1 hypothetical protein -
  QOR57_RS03095 - 546745..547089 (+) 345 WP_000060408.1 HK97-gp10 family putative phage morphogenesis protein -
  QOR57_RS03100 - 547093..547452 (+) 360 WP_000640604.1 hypothetical protein -
  QOR57_RS03105 - 547464..548096 (+) 633 WP_000450517.1 phage major tail protein, TP901-1 family -
  QOR57_RS03110 - 548147..548602 (+) 456 WP_000424190.1 tail assembly chaperone -
  QOR57_RS03115 - 548677..548907 (+) 231 WP_000398752.1 hypothetical protein -
  QOR57_RS03120 - 548936..553162 (+) 4227 WP_017646851.1 tape measure protein -
  QOR57_RS03125 - 553175..554017 (+) 843 WP_000365119.1 phage tail domain-containing protein -
  QOR57_RS03130 - 554030..557857 (+) 3828 WP_283571978.1 phage tail protein -
  QOR57_RS03135 - 557866..558018 (+) 153 WP_000391486.1 hypothetical protein -
  QOR57_RS03140 - 558029..558445 (+) 417 WP_001870768.1 DUF1366 domain-containing protein -
  QOR57_RS03145 - 558508..558669 (+) 162 WP_000222556.1 hypothetical protein -
  QOR57_RS03150 - 558679..558975 (+) 297 WP_000564987.1 hypothetical protein -
  QOR57_RS03155 - 558977..559315 (+) 339 WP_001001962.1 phage holin -
  QOR57_RS03160 - 559317..560036 (+) 720 WP_283571979.1 peptidoglycan amidohydrolase family protein -
  QOR57_RS03165 - 560243..561367 (+) 1125 WP_001207841.1 Fic family protein -
  QOR57_RS03170 - 561521..561721 (+) 201 WP_000076696.1 CsbD family protein -
  QOR57_RS03175 - 561762..561932 (-) 171 WP_000356856.1 hypothetical protein -
  QOR57_RS03180 - 562068..562193 (-) 126 WP_017646884.1 hypothetical protein -
  QOR57_RS03185 prx 562352..562531 (+) 180 WP_000965651.1 hypothetical protein Regulator
  QOR57_RS03190 - 562937..563134 (+) 198 WP_001290370.1 hypothetical protein -
  QOR57_RS03195 - 563178..564110 (-) 933 WP_000254063.1 dihydroorotate oxidase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7035.07 Da        Isoelectric Point: 4.3690

>NTDB_id=1159650 QOR57_RS03185 WP_000965651.1 562352..562531(+) (prx) [Streptococcus agalactiae isolate MRI Z2-338]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPHEKVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1159650 QOR57_RS03185 WP_000965651.1 562352..562531(+) (prx) [Streptococcus agalactiae isolate MRI Z2-338]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGATG
TTATGAGAGAATTGGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508

Multiple sequence alignment