Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   QOR68_RS03435 Genome accession   NZ_OX460984
Coordinates   595414..595593 (+) Length   59 a.a.
NCBI ID   WP_000965655.1    Uniprot ID   A0A7Z6RFA8
Organism   Streptococcus agalactiae isolate MRI Z2-172     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 590414..600593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR68_RS03400 - 590591..592603 (+) 2013 WP_000537332.1 DUF859 family phage minor structural protein -
  QOR68_RS03405 - 592617..592943 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  QOR68_RS03410 - 592918..593130 (+) 213 WP_000698337.1 hypothetical protein -
  QOR68_RS03415 - 593143..593445 (+) 303 WP_000215499.1 hypothetical protein -
  QOR68_RS03420 - 593447..593782 (+) 336 WP_001001961.1 phage holin -
  QOR68_RS03425 - 593784..594503 (+) 720 WP_000236382.1 peptidoglycan amidohydrolase family protein -
  QOR68_RS03430 - 594826..594996 (-) 171 WP_000356856.1 hypothetical protein -
  QOR68_RS03435 prx 595414..595593 (+) 180 WP_000965655.1 hypothetical protein Regulator
  QOR68_RS03440 - 595693..596274 (-) 582 WP_025193995.1 site-specific integrase -
  QOR68_RS03445 - 596310..596576 (-) 267 WP_001872365.1 hypothetical protein -
  QOR68_RS03450 - 596597..597959 (+) 1363 Protein_595 IS3 family transposase -
  QOR68_RS03455 - 598132..598293 (-) 162 WP_000508795.1 NINE protein -
  QOR68_RS03460 - 599035..600312 (+) 1278 WP_000594360.1 ABC transporter permease -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6937.90 Da        Isoelectric Point: 4.3219

>NTDB_id=1159544 QOR68_RS03435 WP_000965655.1 595414..595593(+) (prx) [Streptococcus agalactiae isolate MRI Z2-172]
MLYIDELQEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVREEEVVTVERVEDVMRELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1159544 QOR68_RS03435 WP_000965655.1 595414..595593(+) (prx) [Streptococcus agalactiae isolate MRI Z2-172]
ATGTTATATATAGATGAGCTACAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAGAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

60.345

98.305

0.593
  prx Streptococcus pyogenes MGAS315

73.171

69.492

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508

Multiple sequence alignment