Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   QOR54_RS03380 Genome accession   NZ_OX460968
Coordinates   592252..592431 (+) Length   59 a.a.
NCBI ID   WP_000965651.1    Uniprot ID   A0AB38VMU0
Organism   Streptococcus agalactiae isolate MRI Z2-342     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 587252..597431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR54_RS03335 - 588427..588756 (+) 330 WP_000491467.1 DUF1366 domain-containing protein -
  QOR54_RS03340 - 588731..588943 (+) 213 WP_000698337.1 hypothetical protein -
  QOR54_RS03345 - 588956..589258 (+) 303 WP_000215499.1 hypothetical protein -
  QOR54_RS03350 - 589260..589595 (+) 336 WP_001001965.1 phage holin -
  QOR54_RS03355 - 589597..590316 (+) 720 WP_000236381.1 peptidoglycan amidohydrolase family protein -
  QOR54_RS03360 - 590749..591261 (+) 513 WP_025194683.1 PBECR4 domain-containing protein -
  QOR54_RS03365 - 591421..591621 (+) 201 WP_000076696.1 CsbD family protein -
  QOR54_RS03370 - 591662..591832 (-) 171 WP_000356856.1 hypothetical protein -
  QOR54_RS03375 - 591968..592093 (-) 126 WP_017646884.1 hypothetical protein -
  QOR54_RS03380 prx 592252..592431 (+) 180 WP_000965651.1 hypothetical protein Regulator
  QOR54_RS03385 - 592837..593034 (+) 198 WP_001290370.1 hypothetical protein -
  QOR54_RS03390 - 593078..594010 (-) 933 WP_000254063.1 dihydroorotate oxidase -
  QOR54_RS03395 - 594197..595432 (-) 1236 WP_001185391.1 aminoacyltransferase -
  QOR54_RS03400 - 595451..596662 (-) 1212 WP_000285514.1 aminoacyltransferase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7035.07 Da        Isoelectric Point: 4.3690

>NTDB_id=1159379 QOR54_RS03380 WP_000965651.1 592252..592431(+) (prx) [Streptococcus agalactiae isolate MRI Z2-342]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPHEKVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1159379 QOR54_RS03380 WP_000965651.1 592252..592431(+) (prx) [Streptococcus agalactiae isolate MRI Z2-342]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGATG
TTATGAGAGAATTGGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508

Multiple sequence alignment