Detailed information NTG1155619

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QNH80_RS05030
• Genome accession: NZ_OX352996
• Coordinates: 1039164..1039775 (-)
• Length: 203 a.a.
• NCBI ID: WP_223375679.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 861160_dhsdS
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1034164..1044775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH80_RS05005	-	1034671..1035435 (-)	765	WP_002937291.1	ABC transporter ATP-binding protein	-
QNH80_RS05010	-	1035435..1036382 (-)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
QNH80_RS05015	-	1036385..1037272 (-)	888	WP_012027482.1	branched-chain amino acid ABC transporter permease	-
QNH80_RS05020	-	1037473..1038642 (-)	1170	WP_024418077.1	ABC transporter substrate-binding protein	-
QNH80_RS05025	-	1038775..1039047 (-)	273	WP_002937299.1	YlbG family protein	-
QNH80_RS05030	clpP	1039164..1039775 (-)	612	WP_223375679.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QNH80_RS05035	upp	1039871..1040500 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
QNH80_RS05040	-	1040580..1042196 (-)	1617	WP_074389939.1	alpha-glucosidase	-
QNH80_RS05045	gtfA	1042268..1043716 (-)	1449	WP_074389863.1	sucrose phosphorylase	-
QNH80_RS05050	-	1043786..1044616 (-)	831	WP_002937312.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22345.73 Da
• Isoelectric Point: 6.7324

>NTDB_id=1155619 QNH80_RS05030 WP_223375679.1 1039164..1039775(-) (clpP) [Streptococcus suis isolate 861160_dhsdS]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 612 bp

>NTDB_id=1155619 QNH80_RS05030 WP_223375679.1 1039164..1039775(-) (clpP) [Streptococcus suis isolate 861160_dhsdS]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGTTCTTATGATATTTACTC
ACGCCTTTTGAAAGACCGCATTATCATGTTGACAGGACCAGTTGAGGACAACATGGCAAACTCTATCATTGCACAATTGC
TTTTCCTTGATGCCCAAGACCCTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTT
GCCATTGTAGACACGATGAATTTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCAT
CATTGCATCAAGCGGTGCCAAGGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAGCCAATGGGTGGAA
CTGGTGGTGGTACTCAGCAAACAGATATGGCTATTGCTGCAGAACACCTATTAAAAACACGTAATAAGCTAGAAAAAATC
TTGGCAGACAACTCAGGTAAGACAGTCAAGCAAATCCATAAGGATGCGGAACGCGATTACTGGATGTCAGCTGAAGAAAC
CTTGGCTTACGGATTTATTGACCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	96.552	0.892
clpP	Streptococcus pyogenes MGAS315	92.347	96.552	0.892
clpP	Streptococcus mutans UA159	90.306	96.552	0.872
clpP	Streptococcus thermophilus LMD-9	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	88.776	96.552	0.857
clpP	Streptococcus pneumoniae R6	89.231	96.059	0.857
clpP	Streptococcus pneumoniae Rx1	89.231	96.059	0.857
clpP	Streptococcus pneumoniae D39	89.231	96.059	0.857
clpP	Streptococcus pneumoniae TIGR4	89.231	96.059	0.857
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	96.552	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	95.074	0.557