Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   W903_RS03325 Genome accession   NZ_CP006910
Coordinates   591191..591370 (+) Length   59 a.a.
NCBI ID   WP_000965651.1    Uniprot ID   A0AB38VMU0
Organism   Streptococcus agalactiae CNCTC 10/84     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 586191..596370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  W903_RS10770 (W903_0673) - 586683..586835 (+) 153 WP_000391486.1 hypothetical protein -
  W903_RS03290 (W903_0674) - 586846..587262 (+) 417 WP_001870768.1 DUF1366 domain-containing protein -
  W903_RS10775 (W903_0675) - 587325..587486 (+) 162 WP_000222555.1 hypothetical protein -
  W903_RS03295 (W903_0676) - 587496..587786 (+) 291 WP_000564986.1 hypothetical protein -
  W903_RS03300 (W903_0677) - 587788..588039 (+) 252 WP_000611525.1 phage holin -
  W903_RS03310 (W903_0678) - 588159..589352 (+) 1194 WP_000143381.1 glucosaminidase domain-containing protein -
  W903_RS03315 (W903_0679) - 589718..590233 (+) 516 WP_000837684.1 hypothetical protein -
  W903_RS03320 (W903_0680) - 590360..590560 (+) 201 WP_000076712.1 CsbD family protein -
  W903_RS10780 (W903_0681) - 590601..590771 (-) 171 WP_000356856.1 hypothetical protein -
  W903_RS10950 - 590907..591032 (-) 126 WP_017646884.1 hypothetical protein -
  W903_RS03325 (W903_0682) prx 591191..591370 (+) 180 WP_000965651.1 hypothetical protein Regulator
  W903_RS03330 (W903_0683) - 591776..591973 (+) 198 WP_001290370.1 hypothetical protein -
  W903_RS03335 (W903_0684) - 592017..592949 (-) 933 WP_000254064.1 dihydroorotate oxidase -
  W903_RS03340 (W903_0685) - 593135..594370 (-) 1236 WP_001185382.1 aminoacyltransferase -
  W903_RS03345 (W903_0686) - 594389..595600 (-) 1212 WP_000285509.1 aminoacyltransferase -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 7035.07 Da        Isoelectric Point: 4.3690

>NTDB_id=114940 W903_RS03325 WP_000965651.1 591191..591370(+) (prx) [Streptococcus agalactiae CNCTC 10/84]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPHEKVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=114940 W903_RS03325 WP_000965651.1 591191..591370(+) (prx) [Streptococcus agalactiae CNCTC 10/84]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGATG
TTATGAGAGAATTGGAGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661

  prx Streptococcus pyogenes MGAS315

66.102

100

0.661

  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644

  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61

  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508

  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508


Multiple sequence alignment