Detailed information NTG1147340

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: CKV71_RS06795
• Genome accession: NZ_LT906447
• Coordinates: 1456504..1456830 (+)
• Length: 108 a.a.
• NCBI ID: WP_095105044.1
• Uniprot ID: A0A239U2R2
• Organism: Staphylococcus piscifermentans strain NCTC13836
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1451504..1461830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV71_RS06765	-	1452259..1452459 (+)	201	WP_095107267.1	YqgQ family protein	-
CKV71_RS06770 (SAMEA4384060_01399)	-	1452459..1453445 (+)	987	WP_095105027.1	ROK family glucokinase	-
CKV71_RS06775 (SAMEA4384060_01400)	-	1453445..1453774 (+)	330	WP_095105029.1	MTH1187 family thiamine-binding protein	-
CKV71_RS06780 (SAMEA4384060_01401)	-	1453774..1454397 (+)	624	WP_095105034.1	MBL fold metallo-hydrolase	-
CKV71_RS06785 (SAMEA4384060_01402)	comGA	1454466..1455440 (+)	975	WP_095105036.1	competence type IV pilus ATPase ComGA	Machinery gene
CKV71_RS06790 (SAMEA4384060_01403)	comGB	1455412..1456485 (+)	1074	WP_095105039.1	competence type IV pilus assembly protein ComGB	-
CKV71_RS06795 (SAMEA4384060_01404)	comGC	1456504..1456830 (+)	327	WP_095105044.1	competence type IV pilus major pilin ComGC	Machinery gene
CKV71_RS06800 (SAMEA4384060_01405)	comGD	1456808..1457263 (+)	456	WP_231917514.1	competence type IV pilus minor pilin ComGD	-
CKV71_RS06805 (SAMEA4384060_01406)	comGF	1457452..1457955 (+)	504	WP_095105048.1	competence type IV pilus minor pilin ComGF	-
CKV71_RS06815	-	1458114..1458659 (+)	546	WP_186824446.1	shikimate kinase	-
CKV71_RS06820 (SAMEA4384060_01409)	gcvT	1458836..1459930 (+)	1095	WP_095105056.1	glycine cleavage system aminomethyltransferase GcvT	-
CKV71_RS06825 (SAMEA4384060_01410)	gcvPA	1459951..1461300 (+)	1350	WP_095105058.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12074.27 Da
• Isoelectric Point: 9.9668

>NTDB_id=1147340 CKV71_RS06795 WP_095105044.1 1456504..1456830(+) (comGC) [Staphylococcus piscifermentans strain NCTC13836]
MKNIYLKIKKRNIKAFTLLEMLLVLLVISVLLILIIPNIAKQSEHVQATGCEAQQKMVNSQIEAYTLKNNRKPDSVDDLV
TQGYLKEGQKKCKSGESITIKNGEASIS

Nucleotide

• Length: 327 bp

>NTDB_id=1147340 CKV71_RS06795 WP_095105044.1 1456504..1456830(+) (comGC) [Staphylococcus piscifermentans strain NCTC13836]
ATGAAAAATATTTATTTAAAAATAAAAAAACGAAATATTAAGGCTTTTACGCTTTTAGAAATGTTACTTGTACTTTTAGT
AATCAGTGTACTCTTGATTCTAATCATTCCTAATATCGCAAAGCAATCTGAACATGTGCAAGCAACCGGATGCGAAGCAC
AACAAAAAATGGTAAATAGTCAAATTGAAGCTTATACTTTAAAAAATAATCGAAAACCAGATTCAGTTGATGATCTCGTT
ACTCAAGGATATTTAAAAGAAGGGCAAAAGAAATGTAAATCCGGAGAAAGCATTACTATAAAAAATGGTGAAGCTTCTAT
TAGCTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-35)

3D structure

• AlphaFold DB: A0A239U2R2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	70.526	87.963	0.62
comGC	Staphylococcus aureus N315	70.526	87.963	0.62
comGC/cglC	Streptococcus mitis SK321	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae R6	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae D39	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae TIGR4	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae Rx1	43.396	98.148	0.426
comGC/cglC	Streptococcus mitis NCTC 12261	46.739	85.185	0.398
comYC	Streptococcus gordonii str. Challis substr. CH1	49.398	76.852	0.38
comGC	Bacillus subtilis subsp. subtilis str. 168	41.667	88.889	0.37