Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   BQ8897_RS01045 Genome accession   NZ_LT714196
Coordinates   146968..147150 (+) Length   60 a.a.
NCBI ID   WP_000965649.1    Uniprot ID   A0AAV3JNR0
Organism   Streptococcus agalactiae isolate BM110     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 102648..149376 146968..147150 within 0


Gene organization within MGE regions


Location: 102648..149376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BQ8897_RS00725 (BQ8897_BM110_00132) - 102648..103745 (-) 1098 WP_000570848.1 site-specific integrase -
  BQ8897_RS00730 (BQ8897_BM110_00133) - 103918..104532 (-) 615 WP_000742866.1 hypothetical protein -
  BQ8897_RS00740 (BQ8897_BM110_00134) - 104664..105443 (-) 780 WP_000095652.1 S24 family peptidase -
  BQ8897_RS00745 (BQ8897_BM110_00136) - 105942..106154 (-) 213 WP_000703681.1 hypothetical protein -
  BQ8897_RS00750 (BQ8897_BM110_00137) - 106213..106371 (+) 159 WP_001104143.1 hypothetical protein -
  BQ8897_RS00755 (BQ8897_BM110_00138) - 106469..107110 (-) 642 WP_001008979.1 hypothetical protein -
  BQ8897_RS00765 (BQ8897_BM110_00140) - 107327..107662 (-) 336 WP_000360289.1 hypothetical protein -
  BQ8897_RS00770 (BQ8897_BM110_00141) - 107738..107944 (+) 207 WP_000164462.1 helix-turn-helix transcriptional regulator -
  BQ8897_RS00775 (BQ8897_BM110_00142) - 107998..108957 (+) 960 WP_001156317.1 hypothetical protein -
  BQ8897_RS00780 (BQ8897_BM110_00143) - 108950..109471 (+) 522 WP_000032137.1 hypothetical protein -
  BQ8897_RS00785 (BQ8897_BM110_00144) - 109490..109681 (+) 192 WP_001003168.1 hypothetical protein -
  BQ8897_RS11610 (BQ8897_BM110_00145) - 109709..109885 (-) 177 WP_017645150.1 hypothetical protein -
  BQ8897_RS00790 - 110000..110176 (+) 177 WP_000728090.1 helix-turn-helix domain-containing protein -
  BQ8897_RS00795 (BQ8897_BM110_00146) - 110255..110512 (+) 258 WP_001191791.1 hypothetical protein -
  BQ8897_RS11860 (BQ8897_BM110_00147) - 110542..110673 (+) 132 WP_256948450.1 hypothetical protein -
  BQ8897_RS11615 (BQ8897_BM110_00148) - 110810..110980 (+) 171 WP_000075411.1 hypothetical protein -
  BQ8897_RS00800 (BQ8897_BM110_00149) - 111161..111433 (+) 273 WP_000370473.1 hypothetical protein -
  BQ8897_RS00805 (BQ8897_BM110_00150) - 111423..111803 (-) 381 WP_025196029.1 hypothetical protein -
  BQ8897_RS00810 (BQ8897_BM110_00151) - 111859..112302 (+) 444 WP_025196030.1 hypothetical protein -
  BQ8897_RS00815 (BQ8897_BM110_00152) - 112418..113320 (+) 903 WP_025196031.1 conserved phage C-terminal domain-containing protein -
  BQ8897_RS00820 (BQ8897_BM110_00153) - 113330..114172 (+) 843 WP_000863936.1 ATP-binding protein -
  BQ8897_RS11620 (BQ8897_BM110_00154) - 114172..114318 (+) 147 WP_172838657.1 hypothetical protein -
  BQ8897_RS00825 (BQ8897_BM110_00155) - 114308..114583 (+) 276 WP_000431575.1 hypothetical protein -
  BQ8897_RS00830 (BQ8897_BM110_00156) - 114570..114824 (+) 255 WP_000229416.1 hypothetical protein -
  BQ8897_RS00835 (BQ8897_BM110_00157) - 114827..114988 (+) 162 WP_001288192.1 hypothetical protein -
  BQ8897_RS00840 (BQ8897_BM110_00158) - 114990..115319 (+) 330 WP_086874261.1 hypothetical protein -
  BQ8897_RS00845 (BQ8897_BM110_00159) - 115322..116284 (+) 963 WP_086874262.1 recombinase RecT -
  BQ8897_RS00850 (BQ8897_BM110_00160) - 116281..117078 (+) 798 WP_057485461.1 PD-(D/E)XK nuclease-like domain-containing protein -
  BQ8897_RS00855 (BQ8897_BM110_00161) - 117240..117437 (+) 198 WP_000239531.1 hypothetical protein -
  BQ8897_RS00860 (BQ8897_BM110_00162) - 117427..117903 (+) 477 WP_050151484.1 RusA family crossover junction endodeoxyribonuclease -
  BQ8897_RS11730 - 117893..118241 (+) 349 Protein_122 hypothetical protein -
  BQ8897_RS00870 (BQ8897_BM110_00163) - 118253..118549 (+) 297 WP_000763908.1 nucleotide modification associated domain-containing protein -
  BQ8897_RS00875 (BQ8897_BM110_00164) - 118605..118772 (+) 168 WP_192827993.1 hypothetical protein -
  BQ8897_RS00880 (BQ8897_BM110_00165) - 118803..118967 (+) 165 WP_000159368.1 hypothetical protein -
  BQ8897_RS00885 (BQ8897_BM110_00166) - 118964..119233 (+) 270 WP_000139628.1 hypothetical protein -
  BQ8897_RS11625 (BQ8897_BM110_00167) - 119237..119380 (+) 144 WP_000564605.1 hypothetical protein -
  BQ8897_RS00890 (BQ8897_BM110_00168) - 119377..119889 (+) 513 WP_001019149.1 DUF1642 domain-containing protein -
  BQ8897_RS00895 (BQ8897_BM110_00169) - 119910..120209 (+) 300 WP_001105090.1 hypothetical protein -
  BQ8897_RS00900 (BQ8897_BM110_00171) - 120397..120591 (+) 195 WP_000221698.1 hypothetical protein -
  BQ8897_RS00905 (BQ8897_BM110_00172) - 120588..120854 (+) 267 WP_000660738.1 hypothetical protein -
  BQ8897_RS00910 (BQ8897_BM110_00173) - 121243..121677 (+) 435 WP_000142566.1 ArpU family phage packaging/lysis transcriptional regulator -
  BQ8897_RS11865 (BQ8897_BM110_00175) - 122233..122361 (+) 129 WP_017647279.1 hypothetical protein -
  BQ8897_RS00920 (BQ8897_BM110_00176) - 122415..122792 (-) 378 WP_000964195.1 type II toxin-antitoxin system HicB family antitoxin -
  BQ8897_RS00925 (BQ8897_BM110_00177) - 122845..123030 (-) 186 WP_001132272.1 type II toxin-antitoxin system HicA family toxin -
  BQ8897_RS00930 (BQ8897_BM110_00178) - 123131..123466 (+) 336 WP_001247766.1 HNH endonuclease -
  BQ8897_RS00935 (BQ8897_BM110_00179) - 123639..124106 (+) 468 WP_000532794.1 phage terminase small subunit P27 family -
  BQ8897_RS00940 (BQ8897_BM110_00180) - 124121..125875 (+) 1755 WP_041981227.1 terminase large subunit -
  BQ8897_RS11630 (BQ8897_BM110_00181) - 125872..126042 (+) 171 WP_165736994.1 hypothetical protein -
  BQ8897_RS00945 (BQ8897_BM110_00182) - 126035..126238 (+) 204 WP_001042281.1 hypothetical protein -
  BQ8897_RS00950 (BQ8897_BM110_00183) - 126269..127489 (+) 1221 WP_086874263.1 phage portal protein -
  BQ8897_RS00955 (BQ8897_BM110_00184) - 127467..128132 (+) 666 WP_001124818.1 head maturation protease, ClpP-related -
  BQ8897_RS00960 (BQ8897_BM110_00185) - 128156..129340 (+) 1185 WP_086874264.1 phage major capsid protein -
  BQ8897_RS11635 - 129354..129515 (+) 162 WP_017285214.1 hypothetical protein -
  BQ8897_RS00965 (BQ8897_BM110_00186) - 129518..129820 (+) 303 WP_000218656.1 head-tail connector protein -
  BQ8897_RS00970 (BQ8897_BM110_00187) - 129817..130164 (+) 348 WP_086874265.1 phage head closure protein -
  BQ8897_RS00975 (BQ8897_BM110_00188) - 130161..130538 (+) 378 WP_000160228.1 HK97-gp10 family putative phage morphogenesis protein -
  BQ8897_RS00980 (BQ8897_BM110_00189) - 130535..130960 (+) 426 WP_000559944.1 hypothetical protein -
  BQ8897_RS00985 (BQ8897_BM110_00190) - 130976..131599 (+) 624 WP_000521116.1 major tail protein -
  BQ8897_RS00990 (BQ8897_BM110_00191) gpG 131653..131973 (+) 321 WP_000273027.1 phage tail assembly chaperone G -
  BQ8897_RS11425 - 131997..132170 (+) 174 WP_000928086.1 hypothetical protein -
  BQ8897_RS00995 (BQ8897_BM110_00192) - 132183..136124 (+) 3942 WP_041981230.1 phage tail tape measure protein -
  BQ8897_RS01000 (BQ8897_BM110_00193) - 136121..137632 (+) 1512 WP_000668940.1 distal tail protein Dit -
  BQ8897_RS01005 (BQ8897_BM110_00194) - 137623..141750 (+) 4128 WP_172838658.1 glucosaminidase domain-containing protein -
  BQ8897_RS01010 (BQ8897_BM110_00195) - 141763..143754 (+) 1992 WP_086874266.1 DUF859 family phage minor structural protein -
  BQ8897_RS01015 (BQ8897_BM110_00196) - 143768..144094 (+) 327 WP_025196065.1 DUF1366 domain-containing protein -
  BQ8897_RS01020 (BQ8897_BM110_00197) - 144123..144281 (+) 159 WP_223297809.1 hypothetical protein -
  BQ8897_RS01025 (BQ8897_BM110_00198) - 144300..144587 (+) 288 WP_025196063.1 hypothetical protein -
  BQ8897_RS01030 (BQ8897_BM110_00199) - 144589..144843 (+) 255 WP_025196062.1 phage holin -
  BQ8897_RS01035 (BQ8897_BM110_00201) - 144969..146312 (+) 1344 WP_025197090.1 GH25 family lysozyme -
  BQ8897_RS01040 (BQ8897_BM110_00203) - 146659..146856 (+) 198 WP_017643774.1 CsbD family protein -
  BQ8897_RS01045 (BQ8897_BM110_00204) prx 146968..147150 (+) 183 WP_000965649.1 hypothetical protein Regulator
  BQ8897_RS01050 (BQ8897_BM110_00205) - 147363..148055 (+) 693 WP_000049277.1 histidine phosphatase family protein -
  BQ8897_RS01055 (BQ8897_BM110_00206) - 148052..148804 (+) 753 WP_000739666.1 M15 family metallopeptidase -
  BQ8897_RS01060 (BQ8897_BM110_00207) - 148801..149376 (+) 576 WP_001231504.1 glycoside hydrolase family 73 protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7024.13 Da        Isoelectric Point: 4.1954

>NTDB_id=1146131 BQ8897_RS01045 WP_000965649.1 146968..147150(+) (prx) [Streptococcus agalactiae isolate BM110]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1146131 BQ8897_RS01045 WP_000965649.1 146968..147150(+) (prx) [Streptococcus agalactiae isolate BM110]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS8232

65

100

0.65

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5

  prx Streptococcus pyogenes MGAS315

70.732

68.333

0.483


Multiple sequence alignment