Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQL26_RS01500 Genome accession   NZ_LS483521
Coordinates   274299..274850 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8316     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269299..279850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL26_RS01500 (NCTC8316_00297) comX/sigX/comX2/sigX2 274299..274850 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQL26_RS01505 (NCTC8316_00298) - 275409..275936 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQL26_RS01510 (NCTC8316_00299) yqeH 275936..277054 (+) 1119 WP_111693014.1 ribosome biogenesis GTPase YqeH -
  DQL26_RS01515 (NCTC8316_00300) yhbY 277079..277387 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQL26_RS01520 (NCTC8316_00301) - 277456..278088 (+) 633 WP_111693015.1 nicotinate-nucleotide adenylyltransferase -
  DQL26_RS01525 (NCTC8316_00302) yqeK 278085..278678 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQL26_RS01530 (NCTC8316_00303) rsfS 278702..279055 (+) 354 WP_011017339.1 ribosome silencing factor -
  DQL26_RS01535 (NCTC8316_00304) - 279103..279846 (+) 744 WP_161230140.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1142825 DQL26_RS01500 WP_010921894.1 274299..274850(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8316]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1142825 DQL26_RS01500 WP_010921894.1 274299..274850(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8316]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.