Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | DQL17_RS03425 | Genome accession | NZ_LS483496 |
| Coordinates | 672010..672459 (-) | Length | 149 a.a. |
| NCBI ID | WP_005691824.1 | Uniprot ID | A0A2S9R750 |
| Organism | Haemophilus influenzae strain NCTC8455 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 667010..677459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL17_RS03405 (NCTC8455_00670) | rho | 667397..668659 (+) | 1263 | WP_111688882.1 | transcription termination factor Rho | - |
| DQL17_RS03410 (NCTC8455_00671) | pilD | 668713..669405 (-) | 693 | WP_111688883.1 | prepilin peptidase | Machinery gene |
| DQL17_RS03415 (NCTC8455_00672) | pilC | 669402..670622 (-) | 1221 | WP_005691827.1 | type II secretion system F family protein | Machinery gene |
| DQL17_RS03420 (NCTC8455_00673) | pilB | 670619..672013 (-) | 1395 | WP_005691826.1 | GspE/PulE family protein | Machinery gene |
| DQL17_RS03425 (NCTC8455_00674) | pilA | 672010..672459 (-) | 450 | WP_005691824.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| DQL17_RS03430 (NCTC8455_00675) | ampD | 672574..673128 (+) | 555 | WP_005691822.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| DQL17_RS03435 (NCTC8455_00676) | corC | 673760..674659 (+) | 900 | WP_005654105.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| DQL17_RS03440 (NCTC8455_00677) | lnt | 674682..676211 (+) | 1530 | WP_080003747.1 | apolipoprotein N-acyltransferase | - |
| DQL17_RS03445 (NCTC8455_00678) | rsmE | 676261..676998 (+) | 738 | WP_005691816.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15409.89 Da Isoelectric Point: 9.3908
>NTDB_id=1142728 DQL17_RS03425 WP_005691824.1 672010..672459(-) (pilA) [Haemophilus influenzae strain NCTC8455]
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCGSVTK
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCGSVTK
Nucleotide
Download Length: 450 bp
>NTDB_id=1142728 DQL17_RS03425 WP_005691824.1 672010..672459(-) (pilA) [Haemophilus influenzae strain NCTC8455]
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACAAAATGA
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
93.289 |
100 |
0.933 |
| pilA | Haemophilus influenzae 86-028NP |
87.919 |
100 |
0.879 |
| pilA | Glaesserella parasuis strain SC1401 |
57.047 |
100 |
0.57 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.189 |
99.329 |
0.389 |
| pilA | Vibrio campbellii strain DS40M4 |
39.716 |
94.631 |
0.376 |