Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | DQN71_RS03010 | Genome accession | NZ_LS483471 |
| Coordinates | 577844..578434 (+) | Length | 196 a.a. |
| NCBI ID | WP_015605185.1 | Uniprot ID | - |
| Organism | Streptococcus cristatus strain NCTC13807 | ||
| Function | degradation of ComX; degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 572844..583434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN71_RS02980 (NCTC13807_00577) | - | 573217..573444 (+) | 228 | Protein_525 | nucleoside deaminase | - |
| DQN71_RS02985 (NCTC13807_00578) | - | 573777..574568 (+) | 792 | WP_015605189.1 | Cof-type HAD-IIB family hydrolase | - |
| DQN71_RS02990 (NCTC13807_00579) | - | 574568..575386 (+) | 819 | WP_015605188.1 | Cof-type HAD-IIB family hydrolase | - |
| DQN71_RS02995 (NCTC13807_00580) | ftsY | 575390..576898 (+) | 1509 | WP_015605187.1 | signal recognition particle-docking protein FtsY | - |
| DQN71_RS03005 (NCTC13807_00581) | upp | 577043..577672 (+) | 630 | WP_015605186.1 | uracil phosphoribosyltransferase | - |
| DQN71_RS03010 (NCTC13807_00582) | clpP | 577844..578434 (+) | 591 | WP_015605185.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| DQN71_RS03015 (NCTC13807_00583) | - | 578522..578791 (+) | 270 | WP_015605184.1 | DUF2129 domain-containing protein | - |
| DQN71_RS03020 (NCTC13807_00584) | - | 578891..580051 (+) | 1161 | WP_015605183.1 | ABC transporter substrate-binding protein | - |
| DQN71_RS03025 (NCTC13807_00585) | - | 580203..581072 (+) | 870 | WP_095666451.1 | branched-chain amino acid ABC transporter permease | - |
| DQN71_RS03030 (NCTC13807_00586) | - | 581076..582029 (+) | 954 | WP_015605181.1 | branched-chain amino acid ABC transporter permease | - |
| DQN71_RS03035 (NCTC13807_00587) | - | 582029..582793 (+) | 765 | WP_015605180.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21419.42 Da Isoelectric Point: 4.4829
>NTDB_id=1142309 DQN71_RS03010 WP_015605185.1 577844..578434(+) (clpP) [Streptococcus cristatus strain NCTC13807]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNNLS
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNNLS
Nucleotide
Download Length: 591 bp
>NTDB_id=1142309 DQN71_RS03010 WP_015605185.1 577844..578434(+) (clpP) [Streptococcus cristatus strain NCTC13807]
ATGATTCCTGTAGTTATTGAACAAACCAGCCGTGGTGAGCGTTCTTATGACATTTACTCACGCCTTTTAAAAGACCGTAT
TATCATGCTGACAGGTCCTGTTGAGGACAATATGGCTAATTCTGTTATTGCGCAATTGCTTTTCCTAGATGCACAAGACA
GCACCAAGGACATCTATCTTTATGTTAATACTCCGGGTGGCTCTGTGTCAGCGGGATTGGCGATTGTAGATACTATGAAC
TTCATTAAGTCTGATGTGCAGACGATTGTCATGGGAATGGCAGCTAGCATGGGAACTATCATTGCTTCTAGCGGTGCTAA
GGGCAAACGATTCATGCTTCCAAACGCAGAGTATATGATCCACCAGCCAATGGGTGGTACTGGTGGCGGTACTCAGCAAA
CAGATATGGCCATTGCAGCAGAGCATTTGCTCAAGACTCGTAAGACCTTGGAGCAAATTCTTGCTGATAATTCTGGTAAA
TCGGTTGAGCAAATTCACGCAGATGCCGAACGTGATTACTGGATGAGTGCTCAAGAAACCTTGGAATATGGTTTCATCGA
TGAAATCATGGCTAATAATAATCTTAGCTAG
ATGATTCCTGTAGTTATTGAACAAACCAGCCGTGGTGAGCGTTCTTATGACATTTACTCACGCCTTTTAAAAGACCGTAT
TATCATGCTGACAGGTCCTGTTGAGGACAATATGGCTAATTCTGTTATTGCGCAATTGCTTTTCCTAGATGCACAAGACA
GCACCAAGGACATCTATCTTTATGTTAATACTCCGGGTGGCTCTGTGTCAGCGGGATTGGCGATTGTAGATACTATGAAC
TTCATTAAGTCTGATGTGCAGACGATTGTCATGGGAATGGCAGCTAGCATGGGAACTATCATTGCTTCTAGCGGTGCTAA
GGGCAAACGATTCATGCTTCCAAACGCAGAGTATATGATCCACCAGCCAATGGGTGGTACTGGTGGCGGTACTCAGCAAA
CAGATATGGCCATTGCAGCAGAGCATTTGCTCAAGACTCGTAAGACCTTGGAGCAAATTCTTGCTGATAATTCTGGTAAA
TCGGTTGAGCAAATTCACGCAGATGCCGAACGTGATTACTGGATGAGTGCTCAAGAAACCTTGGAATATGGTTTCATCGA
TGAAATCATGGCTAATAATAATCTTAGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pneumoniae Rx1 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae D39 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae R6 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae TIGR4 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus thermophilus LMD-9 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus thermophilus LMG 18311 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pyogenes JRS4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus mutans UA159 |
89.744 |
99.49 |
0.893 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
88.205 |
99.49 |
0.878 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
87.692 |
99.49 |
0.872 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.292 |
97.959 |
0.561 |