Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   DQL20_RS10745 Genome accession   NZ_LS483444
Coordinates   2159211..2160389 (+) Length   392 a.a.
NCBI ID   WP_006595330.1    Uniprot ID   E7S8M8
Organism   Streptococcus australis strain NCTC13166     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2154211..2165389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL20_RS10720 (NCTC11371_02088) comE/comE2 2155960..2156712 (-) 753 WP_006595334.1 response regulator transcription factor Regulator
  DQL20_RS10725 (NCTC11371_02089) - 2156713..2158038 (-) 1326 WP_006595333.1 GHKL domain-containing protein -
  DQL20_RS10730 (NCTC11371_02090) - 2158038..2158169 (-) 132 WP_006595332.1 bacteriocin -
  DQL20_RS10740 (NCTC11371_02092) rlmH 2158529..2159008 (-) 480 WP_040802864.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL20_RS10745 (NCTC11371_02093) htrA 2159211..2160389 (+) 1179 WP_006595330.1 S1C family serine protease Regulator
  DQL20_RS10750 (NCTC11371_02094) spo0J 2160455..2161216 (+) 762 WP_006595329.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 392 a.a.        Molecular weight: 41340.64 Da        Isoelectric Point: 5.2842

>NTDB_id=1141765 DQL20_RS10745 WP_006595330.1 2159211..2160389(+) (htrA) [Streptococcus australis strain NCTC13166]
MKQSSNFLKKALQLLLVLVVGFTGGILGTLTSFQFTKGNSTNSSQEIKSTKVNRAYKNTTSTSEAVDKVKNAVVSVITYA
ETSEKGFINGETDSDPEVASEGSGVIYKKDGKDAYVVTNAHVLMGATEADILFADGNKVSGEVVGSDTFSDIAVVKISSD
NVTTVAEFGDSSKLTVGETAIAIGSPLGTKFANSVTQGIVSSLGRTVKLKSEDGQNVSTKALQTDAAINPGNSGGPLINI
QGQVIGITSSKISSNGQTAVEGMGFAIPVNDVQNIIEHLEKDGKVIRPALGITMMDLANLSSSDLSQLDIPSKLKGGVLV
RSVENDMPASKYLRRLDIITKIDDTTIESTADLQSALYSHQIGDKIKVIFYRDGKQKTATIELTKSTENLGN

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=1141765 DQL20_RS10745 WP_006595330.1 2159211..2160389(+) (htrA) [Streptococcus australis strain NCTC13166]
ATGAAACAATCATCAAATTTTCTAAAAAAAGCTTTGCAACTTTTACTTGTTCTTGTCGTTGGTTTTACTGGAGGAATCTT
AGGAACCTTAACCTCTTTCCAGTTTACCAAAGGGAATTCTACAAATTCTAGTCAAGAAATAAAATCTACCAAAGTCAATC
GTGCTTATAAGAATACAACATCAACTAGTGAAGCCGTTGATAAGGTTAAAAATGCTGTTGTTTCTGTTATTACCTACGCT
GAAACCTCTGAAAAAGGTTTCATCAATGGAGAAACAGATTCTGATCCAGAAGTAGCTAGTGAAGGTTCAGGTGTTATCTA
TAAAAAAGATGGTAAAGACGCTTATGTAGTAACCAATGCTCACGTGTTAATGGGAGCAACAGAAGCCGATATTCTCTTTG
CAGACGGAAATAAAGTTTCCGGAGAAGTTGTTGGTTCCGATACCTTCTCAGATATTGCGGTTGTCAAAATCAGTTCAGAC
AATGTTACGACCGTGGCTGAATTTGGAGATTCATCTAAGTTGACTGTCGGAGAGACCGCAATCGCTATTGGTAGTCCTTT
AGGGACAAAATTTGCCAATTCCGTTACCCAAGGGATTGTCTCTAGTCTCGGACGTACTGTGAAGCTCAAATCAGAAGACG
GACAAAATGTGTCTACAAAAGCGTTGCAAACGGACGCTGCCATCAACCCAGGGAATTCTGGTGGTCCCCTTATCAATATT
CAGGGACAAGTCATCGGAATTACCTCAAGTAAAATCTCTTCAAATGGCCAAACTGCGGTTGAAGGAATGGGATTTGCTAT
TCCTGTAAATGATGTGCAAAATATTATTGAACATTTAGAAAAAGATGGTAAAGTCATTCGTCCAGCTCTTGGAATTACCA
TGATGGACCTGGCTAACCTATCCTCTTCTGATCTTAGCCAATTAGATATTCCAAGCAAACTAAAAGGTGGGGTTCTTGTC
CGCTCAGTTGAAAATGATATGCCGGCATCCAAGTATTTACGTCGTTTAGATATCATTACAAAAATCGATGATACAACCAT
TGAATCAACTGCAGATTTACAATCTGCCCTCTATTCTCATCAAATTGGTGATAAAATCAAAGTTATTTTCTATAGAGATG
GTAAGCAAAAAACAGCAACCATTGAACTAACAAAATCTACAGAAAATCTTGGAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E7S8M8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

63.01

100

0.63

  htrA Streptococcus gordonii str. Challis substr. CH1

62.437

100

0.628

  htrA Streptococcus pneumoniae D39

62.755

100

0.628

  htrA Streptococcus pneumoniae TIGR4

62.755

100

0.628

  htrA Streptococcus pneumoniae R6

62.755

100

0.628

  htrA Streptococcus pneumoniae Rx1

62.755

100

0.628

  htrA Streptococcus mutans UA159

52

100

0.531


Multiple sequence alignment