Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQL20_RS10750 Genome accession   NZ_LS483444
Coordinates   2160455..2161216 (+) Length   253 a.a.
NCBI ID   WP_006595329.1    Uniprot ID   E7S8M7
Organism   Streptococcus australis strain NCTC13166     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2155455..2166216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL20_RS10720 (NCTC11371_02088) comE/comE2 2155960..2156712 (-) 753 WP_006595334.1 response regulator transcription factor Regulator
  DQL20_RS10725 (NCTC11371_02089) - 2156713..2158038 (-) 1326 WP_006595333.1 GHKL domain-containing protein -
  DQL20_RS10730 (NCTC11371_02090) - 2158038..2158169 (-) 132 WP_006595332.1 bacteriocin -
  DQL20_RS10740 (NCTC11371_02092) rlmH 2158529..2159008 (-) 480 WP_040802864.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL20_RS10745 (NCTC11371_02093) htrA 2159211..2160389 (+) 1179 WP_006595330.1 S1C family serine protease Regulator
  DQL20_RS10750 (NCTC11371_02094) spo0J 2160455..2161216 (+) 762 WP_006595329.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29264.91 Da        Isoelectric Point: 9.0997

>NTDB_id=1141766 DQL20_RS10750 WP_006595329.1 2160455..2161216(+) (spo0J) [Streptococcus australis strain NCTC13166]
MEKIDIIDVKQIRTNPFQPRQTFVQEKLEELAASIKVNGLIQPIIVRKSPIVGYELLAGERRYRAAQMAGFKEIPAIIRE
LSDDDMIKQAIIENLQREDLNPIEEAESYQHLINKGATHEEIAQFMGKSRPYISNMVRLLHLSPAVKEAIKNEQISQGHA
RILVPLKEDLQIYWLEQILKEGLSVRSLEEKVGQKKKRPSKKEKELFLAQEENRLKKILGTEVEIHLTKQEKGSIHISFN
NLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1141766 DQL20_RS10750 WP_006595329.1 2160455..2161216(+) (spo0J) [Streptococcus australis strain NCTC13166]
ATGGAAAAAATTGATATTATTGACGTAAAGCAAATACGAACCAATCCTTTTCAACCTCGTCAAACCTTTGTACAAGAGAA
ATTAGAAGAACTCGCAGCTTCAATCAAAGTAAATGGATTAATCCAGCCCATTATTGTTCGAAAATCTCCTATTGTTGGTT
ATGAACTACTTGCTGGAGAAAGACGCTACCGAGCAGCTCAAATGGCTGGTTTCAAAGAAATCCCAGCGATTATAAGAGAA
TTATCAGATGATGATATGATCAAACAAGCCATTATCGAAAATTTACAAAGGGAAGATTTGAATCCAATTGAAGAGGCCGA
ATCCTACCAACATCTTATTAATAAAGGGGCTACCCATGAAGAAATTGCTCAATTTATGGGAAAATCTCGGCCTTACATCA
GCAACATGGTCCGTTTGCTTCATCTCTCACCAGCTGTCAAAGAAGCCATCAAAAACGAGCAAATTTCACAAGGACATGCC
CGCATTTTAGTTCCCTTAAAGGAAGATCTACAAATCTATTGGCTGGAACAAATTCTGAAAGAAGGACTAAGCGTTCGTAG
TTTGGAAGAAAAGGTTGGTCAAAAAAAGAAAAGGCCAAGTAAAAAAGAGAAAGAACTCTTTTTAGCACAGGAAGAAAATA
GACTAAAAAAGATTCTAGGAACCGAAGTAGAAATCCATCTGACGAAACAAGAAAAAGGCAGTATTCATATTTCATTTAAC
AACCTTGATGAATACCAACGAATTATTAACAGTCTCAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E7S8M7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.779

100

0.518


Multiple sequence alignment