Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | DQL20_RS10575 | Genome accession | NZ_LS483444 |
| Coordinates | 2123610..2124971 (-) | Length | 453 a.a. |
| NCBI ID | WP_006595360.1 | Uniprot ID | E7S8Q9 |
| Organism | Streptococcus australis strain NCTC13166 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2118610..2129971
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL20_RS10560 (NCTC11371_02055) | - | 2119100..2119765 (+) | 666 | WP_231911640.1 | DUF4947 domain-containing protein | - |
| DQL20_RS10565 (NCTC11371_02056) | - | 2119831..2122626 (-) | 2796 | WP_006596974.1 | YhgE/Pip family protein | - |
| DQL20_RS10570 (NCTC11371_02057) | - | 2122762..2123298 (+) | 537 | WP_006595361.1 | TetR/AcrR family transcriptional regulator | - |
| DQL20_RS10575 (NCTC11371_02058) | comB | 2123610..2124971 (-) | 1362 | WP_006595360.1 | bacteriocin secretion accessory protein | Regulator |
| DQL20_RS10580 (NCTC11371_02059) | comA | 2124999..2127152 (-) | 2154 | WP_006595359.1 | peptide cleavage/export ABC transporter ComA | Regulator |
| DQL20_RS10585 (NCTC11371_02060) | rpsD | 2127435..2128046 (-) | 612 | WP_003009175.1 | 30S ribosomal protein S4 | - |
| DQL20_RS10590 (NCTC11371_02061) | - | 2128644..2128916 (-) | 273 | WP_006595358.1 | Veg family protein | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 50803.30 Da Isoelectric Point: 6.1268
>NTDB_id=1141762 DQL20_RS10575 WP_006595360.1 2123610..2124971(-) (comB) [Streptococcus australis strain NCTC13166]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFIVGFSVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQAIQDQEKRLTDYRSLKSALLEGRSLDVTHPLYSLYQSYAQQPHGEENAQAQASFISQLDS
QIQQLEASISNYRIQYAGSGSQQAFSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKTQETLLQKTQILAKDEG
VIHLNDETKGASIVTEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDQEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFIVGFSVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQAIQDQEKRLTDYRSLKSALLEGRSLDVTHPLYSLYQSYAQQPHGEENAQAQASFISQLDS
QIQQLEASISNYRIQYAGSGSQQAFSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKTQETLLQKTQILAKDEG
VIHLNDETKGASIVTEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDQEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
Nucleotide
Download Length: 1362 bp
>NTDB_id=1141762 DQL20_RS10575 WP_006595360.1 2123610..2124971(-) (comB) [Streptococcus australis strain NCTC13166]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTGTGGGTAGTCCC
TTGTTTTCTTTTACTACTGTTTATTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGTGGGACGA
TTGAAGCTACGCGCGTGGTGGACCAAATCCAGTCAACGAGTAATTCTCCCATTCAAGTCAACCATTTGAAGGAAAATAAA
GAGATTAAAAAGGGAGAAATCTTGGTAGAATACCAAGAGGATCAGGAAAAACAACAAGGAATGAGCTTGACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAACAATTAAAACTGTTGAAAACGAGCATTGAGACCGGGGAGAGTCAGTTTACAGGAA
ATGAACATTTTGGGTATGATCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCGCAAGCCCATCAACAA
AATGCGACTATTGCTTCTCAAAATGCTAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGCTATCCAAGACCAGGAGAA
GCGATTAACTGATTACCGTAGTCTAAAATCAGCTCTCCTAGAGGGAAGAAGTCTGGATGTGACTCATCCACTTTACTCCC
TCTACCAGAGTTACGCTCAGCAACCACATGGAGAAGAAAACGCTCAAGCACAAGCTTCTTTTATCAGTCAACTGGATAGT
CAAATCCAGCAGCTAGAAGCGAGTATTTCTAATTATCGAATTCAATATGCGGGATCCGGAAGTCAACAAGCTTTTTCGAC
CAGTTTAGATAGTCAAATAGCCTCGCTGAAAGCTCAACAGCTAAGTAAGGTTGGACAAGATCTGTTGCTTCTTTCTCAGC
AAATCGCAGATTTAGACAGTAAGTTAAAAACACAAGAAACTCTTCTTCAGAAGACTCAGATTCTAGCCAAGGATGAAGGG
GTAATTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAACGGAAGGCACTCCTTTGGCACAAGTTTATCCACTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTTACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACACAGGGAAGTAAACAAAAACCAATTACGCTAGAGGCCCGTATTAGCTCCATTGCTTCGAGTGCCACTCGG
ACTGAACAGGGGAATTTTTTCAAAATCGAGGGAGTTCTTCGTCTCAAGGATCAGGAAGCCAAACTTCTACGGTACGGATT
GGAAGGGAAGTGTGTTCTGATCACAGGAGAAAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCAGGGAACT
AA
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTGTGGGTAGTCCC
TTGTTTTCTTTTACTACTGTTTATTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGTGGGACGA
TTGAAGCTACGCGCGTGGTGGACCAAATCCAGTCAACGAGTAATTCTCCCATTCAAGTCAACCATTTGAAGGAAAATAAA
GAGATTAAAAAGGGAGAAATCTTGGTAGAATACCAAGAGGATCAGGAAAAACAACAAGGAATGAGCTTGACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAACAATTAAAACTGTTGAAAACGAGCATTGAGACCGGGGAGAGTCAGTTTACAGGAA
ATGAACATTTTGGGTATGATCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCGCAAGCCCATCAACAA
AATGCGACTATTGCTTCTCAAAATGCTAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGCTATCCAAGACCAGGAGAA
GCGATTAACTGATTACCGTAGTCTAAAATCAGCTCTCCTAGAGGGAAGAAGTCTGGATGTGACTCATCCACTTTACTCCC
TCTACCAGAGTTACGCTCAGCAACCACATGGAGAAGAAAACGCTCAAGCACAAGCTTCTTTTATCAGTCAACTGGATAGT
CAAATCCAGCAGCTAGAAGCGAGTATTTCTAATTATCGAATTCAATATGCGGGATCCGGAAGTCAACAAGCTTTTTCGAC
CAGTTTAGATAGTCAAATAGCCTCGCTGAAAGCTCAACAGCTAAGTAAGGTTGGACAAGATCTGTTGCTTCTTTCTCAGC
AAATCGCAGATTTAGACAGTAAGTTAAAAACACAAGAAACTCTTCTTCAGAAGACTCAGATTCTAGCCAAGGATGAAGGG
GTAATTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAACGGAAGGCACTCCTTTGGCACAAGTTTATCCACTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTTACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACACAGGGAAGTAAACAAAAACCAATTACGCTAGAGGCCCGTATTAGCTCCATTGCTTCGAGTGCCACTCGG
ACTGAACAGGGGAATTTTTTCAAAATCGAGGGAGTTCTTCGTCTCAAGGATCAGGAAGCCAAACTTCTACGGTACGGATT
GGAAGGGAAGTGTGTTCTGATCACAGGAGAAAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCAGGGAACT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus gordonii str. Challis substr. CH1 |
53.982 |
99.779 |
0.539 |
| comB | Streptococcus mitis SK321 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae Rx1 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae R6 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae D39 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus mitis NCTC 12261 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae TIGR4 |
48.884 |
98.896 |
0.483 |