Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN32_RS01495 Genome accession   NZ_LS483432
Coordinates   274274..274825 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13745     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269274..279825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN32_RS01495 (NCTC13745_00295) comX/sigX/comX2/sigX2 274274..274825 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQN32_RS01500 (NCTC13745_00296) - 275384..275911 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN32_RS01505 (NCTC13745_00297) yqeH 275911..277029 (+) 1119 WP_031488554.1 ribosome biogenesis GTPase YqeH -
  DQN32_RS01510 (NCTC13745_00298) yhbY 277054..277362 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQN32_RS01515 (NCTC13745_00299) - 277431..278063 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  DQN32_RS01520 (NCTC13745_00300) yqeK 278060..278653 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQN32_RS01525 (NCTC13745_00301) rsfS 278677..279030 (+) 354 WP_032460821.1 ribosome silencing factor -
  DQN32_RS01530 (NCTC13745_00302) - 279078..279821 (+) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1141321 DQN32_RS01495 WP_010921894.1 274274..274825(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13745]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1141321 DQN32_RS01495 WP_010921894.1 274274..274825(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13745]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.