Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | DQN28_RS01790 | Genome accession | NZ_LS483430 |
| Coordinates | 326261..326851 (+) | Length | 196 a.a. |
| NCBI ID | WP_002985850.1 | Uniprot ID | A0A9X8T4H8 |
| Organism | Streptococcus pyogenes strain NCTC12044 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 321261..331851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN28_RS01770 (NCTC12044_00349) | - | 322073..323518 (-) | 1446 | WP_010921928.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| DQN28_RS01775 (NCTC12044_00350) | - | 323606..325240 (+) | 1635 | WP_002985856.1 | polysaccharide biosynthesis protein | - |
| DQN28_RS01780 (NCTC12044_00351) | upp | 325408..326037 (+) | 630 | WP_002985854.1 | uracil phosphoribosyltransferase | - |
| DQN28_RS01790 (NCTC12044_00352) | clpP | 326261..326851 (+) | 591 | WP_002985850.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| DQN28_RS01795 (NCTC12044_00353) | - | 327346..327621 (+) | 276 | WP_002985847.1 | YlbG family protein | - |
| DQN28_RS01800 (NCTC12044_00354) | tmk | 327870..328505 (+) | 636 | WP_014635306.1 | dTMP kinase | - |
| DQN28_RS01805 (NCTC12044_00355) | - | 328523..329398 (+) | 876 | WP_011528291.1 | DNA polymerase III subunit delta' | - |
| DQN28_RS09050 | - | 329523..329657 (+) | 135 | WP_014635307.1 | tpl protein | - |
| DQN28_RS01815 (NCTC12044_00356) | yabA | 330061..330384 (+) | 324 | WP_002985838.1 | DNA replication initiation control protein YabA | - |
| DQN28_RS01820 (NCTC12044_00357) | rsmI | 330389..331252 (+) | 864 | WP_002985836.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DQN28_RS01825 (NCTC12044_00358) | - | 331279..331671 (+) | 393 | WP_002985833.1 | DUF5684 domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21648.88 Da Isoelectric Point: 5.2834
>NTDB_id=1141259 DQN28_RS01790 WP_002985850.1 326261..326851(+) (clpP) [Streptococcus pyogenes strain NCTC12044]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=1141259 DQN28_RS01790 WP_002985850.1 326261..326851(+) (clpP) [Streptococcus pyogenes strain NCTC12044]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes MGAS315 |
100 |
100 |
1 |
| clpP | Streptococcus pyogenes JRS4 |
100 |
100 |
1 |
| clpP | Streptococcus mutans UA159 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus pneumoniae Rx1 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae D39 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae R6 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae TIGR4 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus thermophilus LMG 18311 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus thermophilus LMD-9 |
89.796 |
100 |
0.898 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.714 |
100 |
0.857 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.143 |
100 |
0.571 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.995 |
98.469 |
0.561 |