Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN36_RS07775 Genome accession   NZ_LS483425
Coordinates   1544703..1545254 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13737     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1539703..1550254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN36_RS07740 (NCTC13737_01531) - 1539707..1540450 (-) 744 WP_161230140.1 class I SAM-dependent DNA methyltransferase -
  DQN36_RS07745 (NCTC13737_01532) rsfS 1540498..1540851 (-) 354 WP_011017339.1 ribosome silencing factor -
  DQN36_RS07750 (NCTC13737_01533) yqeK 1540875..1541468 (-) 594 WP_111704336.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQN36_RS07755 (NCTC13737_01534) - 1541465..1542097 (-) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  DQN36_RS07760 (NCTC13737_01535) yhbY 1542166..1542474 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQN36_RS07765 (NCTC13737_01536) yqeH 1542499..1543617 (-) 1119 WP_111704337.1 ribosome biogenesis GTPase YqeH -
  DQN36_RS07770 (NCTC13737_01537) - 1543617..1544144 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN36_RS07775 (NCTC13737_01538) comX/sigX/comX2/sigX2 1544703..1545254 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1141160 DQN36_RS07775 WP_010921894.1 1544703..1545254(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13737]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1141160 DQN36_RS07775 WP_010921894.1 1544703..1545254(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13737]
GTGTCCTGTTGCTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.