Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN57_RS01500 Genome accession   NZ_LS483415
Coordinates   271715..272266 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8304     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 266715..277266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN57_RS01500 (NCTC8304_00296) comX/sigX/comX2/sigX2 271715..272266 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQN57_RS01505 (NCTC8304_00297) - 272825..273352 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN57_RS01510 (NCTC8304_00298) yqeH 273352..274470 (+) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  DQN57_RS01515 (NCTC8304_00299) yhbY 274496..274804 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQN57_RS01520 (NCTC8304_00300) - 274873..275505 (+) 633 WP_011017338.1 nicotinate-nucleotide adenylyltransferase -
  DQN57_RS01525 (NCTC8304_00301) yqeK 275502..276095 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQN57_RS01530 (NCTC8304_00302) rsfS 276119..276472 (+) 354 WP_011017339.1 ribosome silencing factor -
  DQN57_RS01535 (NCTC8304_00303) - 276520..277263 (+) 744 WP_011889139.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1140806 DQN57_RS01500 WP_010921894.1 271715..272266(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8304]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1140806 DQN57_RS01500 WP_010921894.1 271715..272266(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8304]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.