Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQN44_RS06905 Genome accession   NZ_LS483414
Coordinates   1335918..1336100 (-) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13736     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1330918..1341100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN44_RS06890 (NCTC13736_01368) - 1331357..1332052 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DQN44_RS06895 (NCTC13736_01369) - 1332291..1333226 (+) 936 WP_021299339.1 dihydroorotate oxidase -
  DQN44_RS06900 (NCTC13736_01370) - 1333526..1335388 (-) 1863 WP_011284945.1 heavy metal translocating P-type ATPase -
  DQN44_RS06905 (NCTC13736_01371) prx 1335918..1336100 (-) 183 WP_011017964.1 hypothetical protein Regulator
  DQN44_RS06910 (NCTC13736_01372) entC3 1336213..1336995 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  DQN44_RS06915 (NCTC13736_01373) - 1337243..1338367 (-) 1125 WP_111706019.1 Fic family protein -
  DQN44_RS06920 (NCTC13736_01374) - 1338503..1339720 (-) 1218 WP_032460576.1 peptidoglycan amidohydrolase family protein -
  DQN44_RS06925 (NCTC13736_01376) - 1339839..1340066 (-) 228 WP_003058873.1 phage holin -
  DQN44_RS06930 (NCTC13736_01377) - 1340063..1340338 (-) 276 WP_002987582.1 hypothetical protein -
  DQN44_RS06935 (NCTC13736_01378) - 1340348..1340965 (-) 618 WP_030127708.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=1140768 DQN44_RS06905 WP_011017964.1 1335918..1336100(-) (prx) [Streptococcus pyogenes strain NCTC13736]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1140768 DQN44_RS06905 WP_011017964.1 1335918..1336100(-) (prx) [Streptococcus pyogenes strain NCTC13736]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1

  prx Streptococcus pyogenes MGAS315

85

100

0.85

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617

  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment