Detailed information NTG1140581

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQN21_RS09825
• Genome accession: NZ_LS483409
• Coordinates: 1970807..1971397 (-)
• Length: 196 a.a.
• NCBI ID: WP_077497513.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus strain NCTC13773
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1965807..1976397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN21_RS09795 (NCTC13773_01990)	-	1966072..1966836 (-)	765	WP_003066020.1	ABC transporter ATP-binding protein	-
DQN21_RS09800 (NCTC13773_01991)	-	1966836..1967789 (-)	954	WP_009854758.1	branched-chain amino acid ABC transporter permease	-
DQN21_RS09805 (NCTC13773_01992)	-	1967793..1968677 (-)	885	WP_009854759.1	branched-chain amino acid ABC transporter permease	-
DQN21_RS09810 (NCTC13773_01993)	-	1968729..1969910 (-)	1182	WP_009854760.1	ABC transporter substrate-binding protein	-
DQN21_RS09815 (NCTC13773_01994)	-	1970023..1970274 (-)	252	WP_009854761.1	YlbG family protein	-
DQN21_RS09820 (NCTC13773_01995)	-	1970267..1970710 (-)	444	WP_009854762.1	YlbF family regulator	-
DQN21_RS09825 (NCTC13773_01996)	clpP	1970807..1971397 (-)	591	WP_077497513.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQN21_RS09830 (NCTC13773_01997)	-	1971529..1972422 (-)	894	WP_077497515.1	DMT family transporter	-
DQN21_RS09835 (NCTC13773_01998)	-	1972535..1973404 (+)	870	WP_077497517.1	LysR family transcriptional regulator	-
DQN21_RS09840 (NCTC13773_01999)	upp	1973470..1974099 (-)	630	WP_003066034.1	uracil phosphoribosyltransferase	-
DQN21_RS09845 (NCTC13773_02000)	-	1974257..1975420 (-)	1164	WP_077497519.1	MalY/PatB family protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21506.50 Da
• Isoelectric Point: 4.3383

>NTDB_id=1140581 DQN21_RS09825 WP_077497513.1 1970807..1971397(-) (clpP) [Streptococcus gallolyticus strain NCTC13773]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKIRQNLEQILADNSGQ
TLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN

Nucleotide

• Length: 591 bp

>NTDB_id=1140581 DQN21_RS09825 WP_077497513.1 1970807..1971397(-) (clpP) [Streptococcus gallolyticus strain NCTC13773]
ATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGCGAACGCTCATACGATATTTATTCACGCCTTTTGAAAGACCGTAT
TATCATGTTGACTGGACCAGTTGAAGATAATATGGCTAACTCTATCATTGCCCAATTGTTGTTCCTTGATGCACAAGATA
ACACTAAAGATATTTACCTTTATGTTAATACTCCTGGTGGTTCAGTATCAGCAGGACTTGCCATTGTTGATACAATGAAT
TTCATTAAATCAGATGTTCAAACAATTGTTATGGGGATGGCAGCTTCAATGGGAACTGTTATTGCGTCATCAGGTGCAAA
AGGTAAACGTTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACACAACAAA
CAGATATGGCAATTGCTGCCGAACACCTTTTGAAAATACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCTGGTCAA
ACATTGGAAAAAGTTCACGCTGACGCCGAACGTGATAACTGGATGAGCGCACAAGAAACCCTCGAATACGGCTTCATCGA
CGAAATCATGGTAAACAACGAATTAAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus thermophilus LMG 18311	94.872	99.49	0.944
clpP	Streptococcus thermophilus LMD-9	94.872	99.49	0.944
clpP	Streptococcus pneumoniae Rx1	93.878	100	0.939
clpP	Streptococcus pneumoniae D39	93.878	100	0.939
clpP	Streptococcus pneumoniae R6	93.878	100	0.939
clpP	Streptococcus pneumoniae TIGR4	93.878	100	0.939
clpP	Streptococcus pyogenes JRS4	89.796	100	0.898
clpP	Streptococcus pyogenes MGAS315	89.796	100	0.898
clpP	Streptococcus mutans UA159	87.755	100	0.878
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	58.763	98.98	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.474	96.939	0.577