Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQN61_RS05295 Genome accession   NZ_LS483391
Coordinates   1007200..1007421 (-) Length   73 a.a.
NCBI ID   WP_011017836.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8320     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1002200..1012421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN61_RS05270 (NCTC8320_01047) - 1004036..1004407 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  DQN61_RS05275 (NCTC8320_01048) - 1004407..1005105 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  DQN61_RS05280 (NCTC8320_01049) - 1005115..1005900 (+) 786 WP_011017835.1 hypothetical protein -
  DQN61_RS05285 (NCTC8320_01050) - 1006027..1006641 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  DQN61_RS05295 (NCTC8320_01052) prx 1007200..1007421 (-) 222 WP_011017836.1 hypothetical protein Regulator
  DQN61_RS05300 (NCTC8320_01053) spel 1007536..1008324 (-) 789 WP_011017837.1 streptococcal pyrogenic exotoxin SpeL -
  DQN61_RS05305 (NCTC8320_01054) spem 1008606..1009319 (-) 714 WP_011017838.1 streptococcal pyrogenic exotoxin SpeM -
  DQN61_RS05310 (NCTC8320_01055) - 1009623..1010489 (-) 867 WP_011017839.1 DUF334 domain-containing protein -
  DQN61_RS05315 (NCTC8320_01056) - 1010477..1011001 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  DQN61_RS05320 (NCTC8320_01057) - 1011141..1011782 (-) 642 Protein_984 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 73 a.a.        Molecular weight: 8540.74 Da        Isoelectric Point: 4.3440

>NTDB_id=1139990 DQN61_RS05295 WP_011017836.1 1007200..1007421(-) (prx) [Streptococcus pyogenes strain NCTC8320]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIIMKKTLSRQKNN

Nucleotide


Download         Length: 222 bp        

>NTDB_id=1139990 DQN61_RS05295 WP_011017836.1 1007200..1007421(-) (prx) [Streptococcus pyogenes strain NCTC8320]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCATAATGAAGAAAACTTTGAGTAGACAGAAAAATAATTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

83.562

0.836
  prx Streptococcus pyogenes MGAS315

84.746

80.822

0.685
  prx Streptococcus pyogenes MGAS8232

84.483

79.452

0.671
  prx Streptococcus pyogenes MGAS315

82.759

79.452

0.658
  prx Streptococcus pyogenes MGAS315

77.966

80.822

0.63
  prx Streptococcus pyogenes MGAS315

87.805

56.164

0.493
  prx Streptococcus pyogenes MGAS315

76.19

57.534

0.438

Multiple sequence alignment