Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN61_RS01450 Genome accession   NZ_LS483391
Coordinates   263125..263676 (+) Length   183 a.a.
NCBI ID   WP_011018214.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8320     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 258125..268676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN61_RS01450 (NCTC8320_00292) comX/sigX/comX2/sigX2 263125..263676 (+) 552 WP_011018214.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQN61_RS01455 (NCTC8320_00293) - 264235..264762 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN61_RS01460 (NCTC8320_00294) yqeH 264762..265880 (+) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  DQN61_RS01465 (NCTC8320_00295) yhbY 265905..266213 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQN61_RS01470 (NCTC8320_00296) - 266282..266914 (+) 633 WP_011017338.1 nicotinate-nucleotide adenylyltransferase -
  DQN61_RS01475 (NCTC8320_00297) yqeK 266911..267504 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQN61_RS01480 (NCTC8320_00298) rsfS 267528..267881 (+) 354 WP_011017339.1 ribosome silencing factor -
  DQN61_RS01485 (NCTC8320_00299) - 267929..268672 (+) 744 WP_041174222.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.12 Da        Isoelectric Point: 10.1133

>NTDB_id=1139973 DQN61_RS01450 WP_011018214.1 263125..263676(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8320]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFKALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1139973 DQN61_RS01450 WP_011018214.1 263125..263676(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8320]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTAAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.