Detailed information
Bioinformatically predicted
Overview
| Name | prx | Type | Regulator |
| Locus tag | DQM64_RS03305 | Genome accession | NZ_LS483387 |
| Coordinates | 584571..584759 (+) | Length | 62 a.a. |
| NCBI ID | WP_000027835.1 | Uniprot ID | A0AAV3JNT7 |
| Organism | Streptococcus agalactiae strain NCTC8187 | ||
| Function | Inhibit ComR activation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 575785..584529 | 584571..584759 | flank | 42 |
| IS/Tn | 583531..584115 | 584571..584759 | flank | 456 |
Gene organization within MGE regions
Location: 575785..584759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM64_RS03265 | - | 577164..577325 (-) | 162 | WP_000508795.1 | NINE protein | - |
| DQM64_RS03270 (NCTC8187_00640) | - | 578067..579344 (+) | 1278 | WP_000594360.1 | ABC transporter permease | - |
| DQM64_RS03275 (NCTC8187_00641) | - | 579354..580010 (+) | 657 | WP_000353149.1 | ABC transporter ATP-binding protein | - |
| DQM64_RS03280 (NCTC8187_00642) | - | 580010..581386 (+) | 1377 | WP_000594351.1 | FtsX-like permease family protein | - |
| DQM64_RS03285 (NCTC8187_00643) | - | 581483..582136 (+) | 654 | WP_000699093.1 | response regulator transcription factor | - |
| DQM64_RS03290 (NCTC8187_00644) | - | 582133..583452 (+) | 1320 | WP_000734169.1 | HAMP domain-containing sensor histidine kinase | - |
| DQM64_RS03295 (NCTC8187_00645) | - | 583509..584151 (-) | 643 | Protein_553 | IS3 family transposase | - |
| DQM64_RS03300 (NCTC8187_00646) | - | 584329..584529 (+) | 201 | WP_000076708.1 | CsbD family protein | - |
| DQM64_RS03305 | prx | 584571..584759 (+) | 189 | WP_000027835.1 | hypothetical protein | Regulator |
Sequence
Protein
Download Length: 62 a.a. Molecular weight: 7180.25 Da Isoelectric Point: 4.7815
>NTDB_id=1139744 DQM64_RS03305 WP_000027835.1 584571..584759(+) (prx) [Streptococcus agalactiae strain NCTC8187]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
Nucleotide
Download Length: 189 bp
>NTDB_id=1139744 DQM64_RS03305 WP_000027835.1 584571..584759(+) (prx) [Streptococcus agalactiae strain NCTC8187]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| prx | Streptococcus pyogenes MGAS315 |
72.222 |
87.097 |
0.629 |
| prx | Streptococcus pyogenes MGAS8232 |
69.091 |
88.71 |
0.613 |
| prx | Streptococcus pyogenes MGAS315 |
66.667 |
87.097 |
0.581 |
| prx | Streptococcus pyogenes MGAS315 |
85 |
64.516 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
61.818 |
88.71 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
74.359 |
62.903 |
0.468 |
| prx | Streptococcus pyogenes MGAS315 |
78.378 |
59.677 |
0.468 |