Detailed information NTG1139444

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQM89_RS01830
• Genome accession: NZ_LS483382
• Coordinates: 337526..338116 (+)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain NCTC13738
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 332526..343116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM89_RS01810 (NCTC13738_00361)	-	333338..334783 (-)	1446	WP_002985858.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
DQM89_RS01815 (NCTC13738_00362)	-	334871..336505 (+)	1635	WP_076634275.1	polysaccharide biosynthesis protein	-
DQM89_RS01820 (NCTC13738_00363)	upp	336673..337302 (+)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
DQM89_RS01830 (NCTC13738_00364)	clpP	337526..338116 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQM89_RS01835 (NCTC13738_00365)	-	338611..338886 (+)	276	WP_002985847.1	YlbG family protein	-
DQM89_RS01840 (NCTC13738_00366)	tmk	339135..339770 (+)	636	WP_014635306.1	dTMP kinase	-
DQM89_RS01845 (NCTC13738_00367)	-	339788..340663 (+)	876	WP_011528291.1	DNA polymerase III subunit delta'	-
DQM89_RS09655	-	340788..340922 (+)	135	WP_014635307.1	tpl protein	-
DQM89_RS01855 (NCTC13738_00368)	yabA	341326..341649 (+)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
DQM89_RS01860 (NCTC13738_00369)	rsmI	341654..342517 (+)	864	WP_021733048.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
DQM89_RS01865 (NCTC13738_00370)	-	342544..342936 (+)	393	WP_002985833.1	DUF5684 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1139444 DQM89_RS01830 WP_002985850.1 337526..338116(+) (clpP) [Streptococcus pyogenes strain NCTC13738]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1139444 DQM89_RS01830 WP_002985850.1 337526..338116(+) (clpP) [Streptococcus pyogenes strain NCTC13738]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561