Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   DQM55_RS02290 Genome accession   NZ_LS483364
Coordinates   445268..446764 (+) Length   498 a.a.
NCBI ID   WP_002902452.1    Uniprot ID   A0A2X4AJX8
Organism   Streptococcus sanguinis strain NCTC11086     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 440268..451764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS02275 (NCTC11086_00451) amiA3 441024..442994 (+) 1971 WP_111675346.1 peptide ABC transporter substrate-binding protein Regulator
  DQM55_RS02285 (NCTC11086_00452) amiA3 443227..445203 (+) 1977 WP_111675347.1 peptide ABC transporter substrate-binding protein Regulator
  DQM55_RS02290 (NCTC11086_00453) amiC 445268..446764 (+) 1497 WP_002902452.1 ABC transporter permease Regulator
  DQM55_RS02295 (NCTC11086_00454) amiD 446764..447690 (+) 927 WP_002920135.1 oligopeptide ABC transporter permease OppC Regulator
  DQM55_RS02300 (NCTC11086_00455) amiE 447699..448766 (+) 1068 WP_002902455.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS02305 (NCTC11086_00456) amiF 448777..449703 (+) 927 WP_002922228.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55843.64 Da        Isoelectric Point: 9.6916

>NTDB_id=1138653 DQM55_RS02290 WP_002902452.1 445268..446764(+) (amiC) [Streptococcus sanguinis strain NCTC11086]
MKKYIFMRILRSIVSIFLVTTLTYAIIYTMVPRRLIFKQDPNYNKIATNKDKKTNYENTIFERMGYIDYYDTKELQEKAS
KEDSSVTTEATEANEKIYQKYIDKLGNGWKLQKFPLSGEFYAVREVPVYERVFEFYANLIQIDHPNVIQDEENPNLERYI
RFENDPSVGWSLVGSGTKHKYLLYFNGQFPFVHQNFITFNLGNSYPTYANIPVLQVITQGQGQTKSSEVQFPTGKKTSSV
NIYSRTYKTPSKADSQDIAKFGKGDAYTATQSNYQNPSMITSSAIIGLIGVALSYLIAIPLGSYMARLKNTWFDSISTAG
LTFMMSLPTIALVYIVRLAGSAVGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPASIVGVIAGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1138653 DQM55_RS02290 WP_002902452.1 445268..446764(+) (amiC) [Streptococcus sanguinis strain NCTC11086]
ATGAAAAAATATATTTTTATGCGTATCTTACGCTCAATTGTGTCGATTTTCTTGGTGACGACCCTGACTTATGCCATTAT
CTATACTATGGTGCCAAGAAGGTTGATTTTCAAGCAGGATCCTAACTATAATAAGATAGCGACCAATAAAGATAAAAAGA
CTAACTATGAAAACACTATCTTTGAGCGGATGGGCTACATTGACTATTATGATACAAAGGAACTGCAGGAGAAAGCCAGC
AAGGAAGATTCTTCTGTTACCACAGAAGCTACTGAAGCAAACGAGAAGATTTATCAGAAGTATATTGATAAACTCGGTAA
TGGCTGGAAATTGCAGAAATTTCCACTGAGCGGAGAATTCTACGCTGTACGTGAAGTACCTGTGTATGAACGTGTCTTTG
AGTTCTATGCTAATTTGATTCAAATTGACCATCCAAATGTTATCCAAGATGAGGAAAATCCAAACCTAGAGCGTTATATC
CGGTTTGAAAATGATCCATCTGTTGGCTGGTCTCTTGTGGGTTCTGGTACCAAGCATAAATATTTGCTTTACTTTAATGG
TCAGTTCCCATTTGTCCACCAGAACTTTATCACCTTTAATTTAGGGAATTCTTATCCAACCTATGCCAATATCCCTGTTC
TGCAGGTTATTACACAAGGGCAAGGACAAACTAAGTCTTCCGAAGTTCAATTCCCAACAGGTAAAAAGACATCGTCTGTA
AATATCTATTCTCGTACCTATAAGACGCCAAGCAAAGCCGATTCACAGGACATTGCTAAGTTTGGTAAGGGAGATGCCTA
TACGGCGACTCAAAGCAACTATCAAAATCCATCCATGATTACCAGCTCAGCCATTATCGGTTTGATTGGTGTGGCTCTGT
CTTATCTGATTGCTATTCCACTCGGTTCTTACATGGCTCGACTCAAAAACACATGGTTTGATAGCATTTCTACAGCGGGC
TTGACCTTTATGATGTCACTGCCAACCATCGCCTTGGTCTACATCGTCCGTTTGGCTGGCTCTGCTGTCGGTCTTCCAGA
CTCCTTCCCAATCTTGGGAGCGGGAGATTGGCGTTCTTATGTCTTGCCAGCTGTTATCCTAGGCCTTTTGAGTGCTCCTT
GGACAGCTGTTTGGATTCGCCGGTATATGATTGACTTGCAGTCTCAGGACTTTGTCCGCTTTGCGCGTGCTAAGGGACTC
TCTGAAAAAGAAATTTCTAACAAGCACATCTTTAAAAACGCTATGGTGCCGCTGGTATCTAGTATCCCAGCTTCTATCGT
TGGTGTTATTGCAGGTGCGACTCTGACAGAAACTGTCTTTGCTTTTCCTGGTATGGGTAAGATGCTGATTGATTCTGTTA
AGGCATCCAATAACTCTATGGTTGTTGGTCTTGTATTCATCTTCACATGTCTGTCTATCTTTGCTCTCTTGCTGGGTGAC
ATTCTGATGACTGTACTGGACCCACGTATTAAGTTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X4AJX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

75.904

100

0.759
  amiC Streptococcus thermophilus LMD-9

75.703

100

0.757
  amiC Streptococcus thermophilus LMG 18311

75.703

100

0.757

Multiple sequence alignment