Detailed information NTG1138656

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM55_RS02305
• Genome accession: NZ_LS483364
• Coordinates: 448777..449703 (+)
• Length: 308 a.a.
• NCBI ID: WP_002922228.1
• Uniprot ID: A0A2X3Y353
• Organism: Streptococcus sanguinis strain NCTC11086
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 443777..454703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM55_RS02290 (NCTC11086_00453)	amiC	445268..446764 (+)	1497	WP_002902452.1	ABC transporter permease	Regulator
DQM55_RS02295 (NCTC11086_00454)	amiD	446764..447690 (+)	927	WP_002920135.1	oligopeptide ABC transporter permease OppC	Regulator
DQM55_RS02300 (NCTC11086_00455)	amiE	447699..448766 (+)	1068	WP_002902455.1	ABC transporter ATP-binding protein	Regulator
DQM55_RS02305 (NCTC11086_00456)	amiF	448777..449703 (+)	927	WP_002922228.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34868.90 Da
• Isoelectric Point: 6.1178

>NTDB_id=1138656 DQM55_RS02305 WP_002922228.1 448777..449703(+) (amiF) [Streptococcus sanguinis strain NCTC11086]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDIFYEGKKINGKKSKA
EEADLIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFDSEEDRQRKVKDIINEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPVHPYTQSLLSAVPIPDPILERKKVLKVYDPEQHDYSVDKPEMAEIRPGHYVWANKAELEKYKQEQK

Nucleotide

• Length: 927 bp

>NTDB_id=1138656 DQM55_RS02305 WP_002922228.1 448777..449703(+) (amiF) [Streptococcus sanguinis strain NCTC11086]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGCGAAGGAAGTAAGAAATTTGTAGCAGTAAAAAA
CGCAAATTTCTTCATCAACAAGGGGGAAACTTTCTCTCTTGTAGGAGAATCAGGCTCTGGTAAGACTACTATTGGTCGAG
CTATTATCGGCCTTAATGATACCAGTGCAGGTGATATCTTCTACGAAGGCAAAAAGATTAATGGTAAAAAGTCAAAAGCA
GAAGAAGCAGACTTGATTCGCAAGATTCAGATGATTTTTCAAGACCCAGCAGCTAGCCTGAATGAACGTGCAACGGTTGA
CTATATCATATCTGAGGGTCTCTATAATTACCATTTGTTTGATAGCGAAGAAGATCGTCAAAGAAAAGTCAAAGATATCA
TCAATGAAGTTGGCTTGTTAGCTGAGCATTTAACTCGCTATCCTCACGAATTCTCTGGTGGACAGCGTCAGCGGATTGGG
ATTGCTCGTGCTCTGGTCATGCAACCAGACTTCGTGATTGCTGATGAGCCGATTTCCGCCTTGGACGTATCTGTCCGAGC
ACAGGTCTTGAATCTTTTGAAAAAATTTCAAAAAGAGCTTGGCTTGACCTACCTGTTTATTGCCCATGACCTTTCGGTAG
TTCGTTTTATTTCTGATCGTATCGCCGTGATTTACAAAGGTGTCATTGTAGAAGTGGCAGAGACAGAGGAATTGTTCAAC
CATCCTGTCCACCCTTATACACAATCTCTGCTCTCAGCTGTTCCAATTCCAGACCCAATCTTGGAGCGTAAAAAAGTGTT
GAAGGTCTATGATCCTGAACAGCACGATTATTCAGTTGATAAACCAGAAATGGCAGAGATTCGTCCGGGACACTATGTCT
GGGCTAATAAAGCTGAACTCGAAAAGTATAAACAAGAACAAAAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A2X3Y353

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	85.668	99.675	0.854
amiF	Streptococcus thermophilus LMG 18311	85.016	99.675	0.847
amiF	Streptococcus thermophilus LMD-9	84.691	99.675	0.844