Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQM47_RS06345 Genome accession   NZ_LS483360
Coordinates   1231761..1231943 (-) Length   60 a.a.
NCBI ID   WP_002986897.1    Uniprot ID   A0A660A6E2
Organism   Streptococcus pyogenes strain NCTC10876     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1226761..1236943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM47_RS06320 (NCTC10876_01265) - 1227908..1228825 (+) 918 WP_111695834.1 neutral zinc metallopeptidase -
  DQM47_RS06325 (NCTC10876_01266) - 1228929..1229597 (-) 669 WP_023610402.1 ABC transporter ATP-binding protein -
  DQM47_RS06330 (NCTC10876_01267) - 1229607..1230683 (-) 1077 WP_010922123.1 FtsX-like permease family protein -
  DQM47_RS06335 (NCTC10876_01268) - 1230756..1231142 (-) 387 WP_002990406.1 YbgA family protein -
  DQM47_RS06340 (NCTC10876_01269) - 1231135..1231512 (-) 378 WP_002993028.1 OsmC family protein -
  DQM47_RS06345 (NCTC10876_01270) prx 1231761..1231943 (-) 183 WP_002986897.1 hypothetical protein Regulator
  DQM47_RS06350 (NCTC10876_01271) - 1232154..1232393 (+) 240 WP_002986898.1 hypothetical protein -
  DQM47_RS06355 (NCTC10876_01272) - 1232433..1232906 (+) 474 WP_002986905.1 hypothetical protein -
  DQM47_RS06360 (NCTC10876_01273) - 1232908..1233264 (+) 357 WP_002986907.1 hypothetical protein -
  DQM47_RS06365 (NCTC10876_01274) - 1233332..1234198 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  DQM47_RS06370 (NCTC10876_01275) - 1234186..1234710 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  DQM47_RS06375 (NCTC10876_01276) - 1234850..1236052 (-) 1203 WP_023611747.1 glucosaminidase domain-containing protein -
  DQM47_RS06380 (NCTC10876_01277) - 1236168..1236395 (-) 228 WP_000609113.1 phage holin -
  DQM47_RS06385 (NCTC10876_01278) - 1236392..1236667 (-) 276 WP_002987582.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6772.68 Da        Isoelectric Point: 3.9286

>NTDB_id=1138473 DQM47_RS06345 WP_002986897.1 1231761..1231943(-) (prx) [Streptococcus pyogenes strain NCTC10876]
MLTYDEFKQAIDDGYIVGDTVAIVRKNGQIFDYVLPGEKVRPSEVVAEEIVEEVVVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1138473 DQM47_RS06345 WP_002986897.1 1231761..1231943(-) (prx) [Streptococcus pyogenes strain NCTC10876]
ATGCTAACATACGACGAGTTTAAGCAAGCAATCGATGACGGATATATCGTAGGAGACACAGTAGCGATTGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGCGAAAAAGTCAGACCGTCGGAGGTTGTGGCTGAGGAAATAGTGGAAGAGG
TGGTGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983

  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS8232

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567


Multiple sequence alignment