Detailed information NTG1138266

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQM51_RS02115
• Genome accession: NZ_LS483356
• Coordinates: 375899..376489 (+)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain NCTC8230
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 370899..381489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM51_RS02095 (NCTC8230_00419)	-	371710..373155 (-)	1446	WP_002985858.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
DQM51_RS02100 (NCTC8230_00420)	-	373243..374877 (+)	1635	WP_002985856.1	polysaccharide biosynthesis protein	-
DQM51_RS02105 (NCTC8230_00421)	upp	375045..375674 (+)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
DQM51_RS02115 (NCTC8230_00422)	clpP	375899..376489 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQM51_RS02120 (NCTC8230_00423)	-	376984..377259 (+)	276	WP_002985847.1	YlbG family protein	-
DQM51_RS02125 (NCTC8230_00424)	tmk	377508..378143 (+)	636	WP_032464192.1	dTMP kinase	-
DQM51_RS02130 (NCTC8230_00425)	-	378161..379036 (+)	876	WP_111713154.1	DNA polymerase III subunit delta'	-
DQM51_RS02135 (NCTC8230_00426)	-	379055..379294 (+)	240	WP_032467296.1	PSP1 C-terminal domain-containing protein	-
DQM51_RS02140 (NCTC8230_00427)	yabA	379698..380021 (+)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
DQM51_RS02145 (NCTC8230_00428)	rsmI	380026..380889 (+)	864	WP_002985836.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
DQM51_RS02150 (NCTC8230_00429)	-	380916..381308 (+)	393	WP_002985833.1	DUF5684 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1138266 DQM51_RS02115 WP_002985850.1 375899..376489(+) (clpP) [Streptococcus pyogenes strain NCTC8230]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1138266 DQM51_RS02115 WP_002985850.1 375899..376489(+) (clpP) [Streptococcus pyogenes strain NCTC8230]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561