Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQL39_RS03335 Genome accession   NZ_LS483353
Coordinates   625629..625817 (+) Length   62 a.a.
NCBI ID   WP_032461628.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC4001     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 620629..630817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL39_RS03300 (NCTC4001_00662) - 621056..621217 (+) 162 WP_002987333.1 hypothetical protein -
  DQL39_RS03305 (NCTC4001_00663) - 621220..621831 (+) 612 WP_038433337.1 DUF1366 domain-containing protein -
  DQL39_RS03310 (NCTC4001_00664) - 621847..622122 (+) 276 WP_002987582.1 hypothetical protein -
  DQL39_RS03315 (NCTC4001_00665) - 622119..622346 (+) 228 WP_000609113.1 phage holin -
  DQL39_RS03320 (NCTC4001_00666) - 622472..623800 (+) 1329 WP_038433339.1 GH25 family lysozyme -
  DQL39_RS03325 (NCTC4001_00667) - 623879..624319 (-) 441 WP_038433341.1 hypothetical protein -
  DQL39_RS03330 (NCTC4001_00668) sda3 624591..625391 (-) 801 WP_162472510.1 streptodornase Sda3 -
  DQL39_RS03335 (NCTC4001_00669) prx 625629..625817 (+) 189 WP_032461628.1 hypothetical protein Regulator
  DQL39_RS03345 (NCTC4001_00671) - 626408..627022 (+) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  DQL39_RS03350 (NCTC4001_00672) - 627149..627934 (-) 786 WP_038433345.1 hypothetical protein -
  DQL39_RS03355 (NCTC4001_00673) - 627944..628642 (-) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  DQL39_RS03360 (NCTC4001_00674) - 628642..629013 (-) 372 WP_038433347.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7312.35 Da        Isoelectric Point: 4.1813

>NTDB_id=1138092 DQL39_RS03335 WP_032461628.1 625629..625817(+) (prx) [Streptococcus pyogenes strain NCTC4001]
MLTYDEFKQAIDNGYITADTVMIVRKNEQIFDYVLPHEKVKNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1138092 DQL39_RS03335 WP_032461628.1 625629..625817(+) (prx) [Streptococcus pyogenes strain NCTC4001]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGAACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACCGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

88.71

100

0.887

  prx Streptococcus pyogenes MGAS8232

87.931

93.548

0.823

  prx Streptococcus pyogenes MGAS315

87.931

93.548

0.823

  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774

  prx Streptococcus pyogenes MGAS315

79.661

95.161

0.758

  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565

  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5


Multiple sequence alignment