Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL37_RS03305 Genome accession   NZ_LS483352
Coordinates   600952..601131 (+) Length   59 a.a.
NCBI ID   WP_030127450.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 595952..606131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS03260 (NCTC12052_00642) - 596006..596281 (+) 276 WP_002987582.1 hypothetical protein -
  DQL37_RS03265 (NCTC12052_00643) - 596278..596505 (+) 228 WP_000609113.1 phage holin -
  DQL37_RS03270 (NCTC12052_00644) - 596621..597823 (+) 1203 WP_111685711.1 glucosaminidase domain-containing protein -
  DQL37_RS09860 - 597856..598038 (+) 183 Protein_589 holin -
  DQL37_RS03280 (NCTC12052_00645) - 598190..598732 (+) 543 WP_032465096.1 Panacea domain-containing protein -
  DQL37_RS03285 (NCTC12052_00646) - 598736..599572 (+) 837 WP_032465095.1 hypothetical protein -
  DQL37_RS03290 (NCTC12052_00647) - 599640..599996 (-) 357 WP_003055891.1 hypothetical protein -
  DQL37_RS03295 (NCTC12052_00648) - 599998..600471 (-) 474 WP_003055874.1 hypothetical protein -
  DQL37_RS03300 (NCTC12052_00649) - 600510..600749 (-) 240 WP_003055856.1 hypothetical protein -
  DQL37_RS03305 (NCTC12052_00650) prx 600952..601131 (+) 180 WP_030127450.1 hypothetical protein Regulator
  DQL37_RS10010 - 601309..601584 (-) 276 Protein_596 tyrosine-type recombinase/integrase -
  DQL37_RS09865 - 601589..601859 (+) 271 Protein_597 rod shape-determining protein RodA -
  DQL37_RS03315 (NCTC12052_00653) - 601962..602522 (+) 561 WP_011017599.1 HAD-IA family hydrolase -
  DQL37_RS03320 (NCTC12052_00654) gyrB 602523..604475 (+) 1953 WP_002994058.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6979.01 Da        Isoelectric Point: 3.8662

>NTDB_id=1138047 DQL37_RS03305 WP_030127450.1 600952..601131(+) (prx) [Streptococcus pyogenes strain NCTC12052]
MLTYDEFKQAIDDGYITTDAVMIVRKNGQIFDYVLPGEEVRPWEIVIEERVAEVLMELW

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1138047 DQL37_RS03305 WP_030127450.1 600952..601131(+) (prx) [Streptococcus pyogenes strain NCTC12052]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGATGACGGCTATATCACAACAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAAATTTTTGATTATGTCTTGCCAGGAGAGGAAGTCAGGCCATGGGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGTTGATGGAATTGTGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

81.034

98.305

0.797
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS8232

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS315

87.805

69.492

0.61
  prx Streptococcus pyogenes MGAS315

85.714

71.186

0.61
  prx Streptococcus pyogenes MGAS315

73.171

69.492

0.508

Multiple sequence alignment