Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQL37_RS01530 Genome accession   NZ_LS483352
Coordinates   274143..274694 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269143..279694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS01530 (NCTC12052_00301) comX/sigX/comX2/sigX2 274143..274694 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQL37_RS01535 (NCTC12052_00302) - 275253..275780 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQL37_RS01540 (NCTC12052_00303) yqeH 275780..276898 (+) 1119 WP_109828497.1 ribosome biogenesis GTPase YqeH -
  DQL37_RS01545 (NCTC12052_00304) yhbY 276923..277231 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DQL37_RS01550 (NCTC12052_00305) - 277300..277932 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  DQL37_RS01555 (NCTC12052_00306) yqeK 277929..278522 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQL37_RS01560 (NCTC12052_00307) rsfS 278546..278899 (+) 354 WP_038432978.1 ribosome silencing factor -
  DQL37_RS01565 (NCTC12052_00308) - 278947..279690 (+) 744 WP_038432800.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1138035 DQL37_RS01530 WP_010921894.1 274143..274694(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC12052]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1138035 DQL37_RS01530 WP_010921894.1 274143..274694(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC12052]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.