Detailed information NTG1137782

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQM50_RS08215
• Genome accession: NZ_LS483347
• Coordinates: 1568011..1568601 (-)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain NCTC8324
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1563011..1573601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM50_RS08180 (NCTC8324_01641)	-	1563195..1563587 (-)	393	WP_023609786.1	DUF5684 domain-containing protein	-
DQM50_RS08185 (NCTC8324_01642)	rsmI	1563614..1564477 (-)	864	WP_023609789.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
DQM50_RS08190 (NCTC8324_01643)	yabA	1564482..1564805 (-)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
DQM50_RS08195 (NCTC8324_01644)	-	1565209..1565448 (-)	240	WP_085613913.1	PSP1 C-terminal domain-containing protein	-
DQM50_RS08200 (NCTC8324_01645)	-	1565467..1566342 (-)	876	WP_085613914.1	DNA polymerase III subunit delta'	-
DQM50_RS08205 (NCTC8324_01646)	tmk	1566360..1566995 (-)	636	WP_010921930.1	dTMP kinase	-
DQM50_RS08210 (NCTC8324_01647)	-	1567244..1567519 (-)	276	WP_002985847.1	YlbG family protein	-
DQM50_RS08215 (NCTC8324_01648)	clpP	1568011..1568601 (-)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQM50_RS08225 (NCTC8324_01649)	upp	1568824..1569453 (-)	630	WP_085613915.1	uracil phosphoribosyltransferase	-
DQM50_RS08230 (NCTC8324_01650)	-	1569621..1571255 (-)	1635	WP_085613916.1	polysaccharide biosynthesis protein	-
DQM50_RS08235 (NCTC8324_01651)	-	1571343..1572788 (+)	1446	WP_085613917.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1137782 DQM50_RS08215 WP_002985850.1 1568011..1568601(-) (clpP) [Streptococcus pyogenes strain NCTC8324]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1137782 DQM50_RS08215 WP_002985850.1 1568011..1568601(-) (clpP) [Streptococcus pyogenes strain NCTC8324]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACTAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGTACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561