Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | DQL21_RS07390 | Genome accession | NZ_LS483343 |
| Coordinates | 1427910..1428500 (-) | Length | 196 a.a. |
| NCBI ID | WP_018030321.1 | Uniprot ID | - |
| Organism | Streptococcus ferus strain NCTC12278 | ||
| Function | degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1422910..1433500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL21_RS07360 (NCTC12278_01470) | - | 1423215..1423979 (-) | 765 | WP_018030315.1 | ABC transporter ATP-binding protein | - |
| DQL21_RS07365 (NCTC12278_01471) | - | 1423979..1424932 (-) | 954 | WP_018030316.1 | branched-chain amino acid ABC transporter permease | - |
| DQL21_RS07370 (NCTC12278_01472) | - | 1424936..1425805 (-) | 870 | WP_018030317.1 | branched-chain amino acid ABC transporter permease | - |
| DQL21_RS07375 (NCTC12278_01473) | - | 1425893..1427065 (-) | 1173 | WP_018030318.1 | ABC transporter substrate-binding protein | - |
| DQL21_RS07380 (NCTC12278_01474) | - | 1427168..1427416 (-) | 249 | WP_018030319.1 | DUF2129 domain-containing protein | - |
| DQL21_RS07385 (NCTC12278_01475) | - | 1427410..1427862 (-) | 453 | WP_018030320.1 | YlbF family regulator | - |
| DQL21_RS07390 (NCTC12278_01476) | clpP | 1427910..1428500 (-) | 591 | WP_018030321.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| DQL21_RS07395 (NCTC12278_01477) | upp | 1428620..1429249 (-) | 630 | WP_018030322.1 | uracil phosphoribosyltransferase | - |
| DQL21_RS07400 (NCTC12278_01478) | - | 1429348..1430511 (-) | 1164 | WP_018030323.1 | MalY/PatB family protein | - |
| DQL21_RS07405 (NCTC12278_01479) | - | 1430514..1431608 (-) | 1095 | WP_018030324.1 | cystathionine gamma-synthase | - |
| DQL21_RS07410 (NCTC12278_01480) | - | 1431749..1433383 (-) | 1635 | WP_018030325.1 | polysaccharide biosynthesis protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21692.90 Da Isoelectric Point: 5.7235
>NTDB_id=1137608 DQL21_RS07390 WP_018030321.1 1427910..1428500(-) (clpP) [Streptococcus ferus strain NCTC12278]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGVAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGAGTQQTDMAIAAERLLHTRNRLEKILANNSGK
TVKQIHKDAERDYWMDAKETLKYGFIDEIMENNDLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGVAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGAGTQQTDMAIAAERLLHTRNRLEKILANNSGK
TVKQIHKDAERDYWMDAKETLKYGFIDEIMENNDLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1137608 DQL21_RS07390 WP_018030321.1 1427910..1428500(-) (clpP) [Streptococcus ferus strain NCTC12278]
ATGATTCCAGTAGTTATTGAACAAACGAGCCGCGGCGAACGCTCCTATGACATTTACTCCCGCCTCTTAAAAGACCGGAT
TATTATGCTGACAGGTCCAGTAGAAGACAATATGGCCAACTCTATCATTGCCCAATTGCTCTTTTTGGATGCACAAGATT
CCACTAAAGACATTTACCTTTATGTCAATACTCCGGGTGGTTCGGTTTCAGCAGGCCTTGCCATTGTTGATACCATGAAC
TTCATCAAATCAGACGTGCAGACGATCGTTATGGGGGTTGCTGCGTCCATGGGAACGATTATTGCGTCCAGCGGTACCAA
AGGCAAACGCTTTATGCTGCCAAATGCAGAGTACCTTATTCATCAGCCTATGGGAGGAACTGGTGCAGGCACTCAGCAAA
CCGACATGGCTATTGCTGCCGAAAGGCTCTTGCATACCCGAAACCGTCTTGAAAAAATTCTTGCCAATAATTCAGGTAAA
ACGGTTAAACAGATCCATAAAGATGCTGAACGGGATTACTGGATGGATGCCAAAGAAACGCTTAAATATGGCTTCATCGA
TGAAATTATGGAAAACAACGACTTAAAATAA
ATGATTCCAGTAGTTATTGAACAAACGAGCCGCGGCGAACGCTCCTATGACATTTACTCCCGCCTCTTAAAAGACCGGAT
TATTATGCTGACAGGTCCAGTAGAAGACAATATGGCCAACTCTATCATTGCCCAATTGCTCTTTTTGGATGCACAAGATT
CCACTAAAGACATTTACCTTTATGTCAATACTCCGGGTGGTTCGGTTTCAGCAGGCCTTGCCATTGTTGATACCATGAAC
TTCATCAAATCAGACGTGCAGACGATCGTTATGGGGGTTGCTGCGTCCATGGGAACGATTATTGCGTCCAGCGGTACCAA
AGGCAAACGCTTTATGCTGCCAAATGCAGAGTACCTTATTCATCAGCCTATGGGAGGAACTGGTGCAGGCACTCAGCAAA
CCGACATGGCTATTGCTGCCGAAAGGCTCTTGCATACCCGAAACCGTCTTGAAAAAATTCTTGCCAATAATTCAGGTAAA
ACGGTTAAACAGATCCATAAAGATGCTGAACGGGATTACTGGATGGATGCCAAAGAAACGCTTAAATATGGCTTCATCGA
TGAAATTATGGAAAACAACGACTTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus mutans UA159 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pyogenes JRS4 |
91.327 |
100 |
0.913 |
| clpP | Streptococcus pyogenes MGAS315 |
91.327 |
100 |
0.913 |
| clpP | Streptococcus thermophilus LMD-9 |
88.265 |
100 |
0.883 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
88.265 |
100 |
0.883 |
| clpP | Streptococcus thermophilus LMG 18311 |
88.265 |
100 |
0.883 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
87.755 |
100 |
0.878 |
| clpP | Streptococcus pneumoniae Rx1 |
87.692 |
99.49 |
0.872 |
| clpP | Streptococcus pneumoniae D39 |
87.692 |
99.49 |
0.872 |
| clpP | Streptococcus pneumoniae R6 |
87.692 |
99.49 |
0.872 |
| clpP | Streptococcus pneumoniae TIGR4 |
87.692 |
99.49 |
0.872 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.995 |
98.469 |
0.561 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
55.612 |
100 |
0.556 |