Detailed information
Bioinformatically predicted
Overview
| Name | prx | Type | Regulator |
| Locus tag | DQL56_RS07465 | Genome accession | NZ_LS483342 |
| Coordinates | 1435495..1435683 (-) | Length | 62 a.a. |
| NCBI ID | WP_000027835.1 | Uniprot ID | A0AAV3JNT7 |
| Organism | Streptococcus agalactiae strain NCTC11930 | ||
| Function | Inhibit ComR activation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1436139..1444912 | 1435495..1435683 | flank | 456 |
| IS/Tn | 1436139..1436750 | 1435495..1435683 | flank | 456 |
Gene organization within MGE regions
Location: 1435495..1444912
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL56_RS07465 | prx | 1435495..1435683 (-) | 189 | WP_000027835.1 | hypothetical protein | Regulator |
| DQL56_RS07470 (NCTC11930_01481) | - | 1435725..1435925 (-) | 201 | WP_000076708.1 | CsbD family protein | - |
| DQL56_RS07475 (NCTC11930_01482) | - | 1436103..1436750 (+) | 648 | Protein_1390 | IS3 family transposase | - |
| DQL56_RS07480 (NCTC11930_01483) | - | 1436802..1438121 (-) | 1320 | WP_000734169.1 | sensor histidine kinase | - |
| DQL56_RS07485 (NCTC11930_01484) | - | 1438118..1438771 (-) | 654 | WP_000699093.1 | response regulator transcription factor | - |
| DQL56_RS07490 (NCTC11930_01485) | - | 1438868..1440244 (-) | 1377 | WP_000594351.1 | ABC transporter permease | - |
| DQL56_RS07495 (NCTC11930_01486) | - | 1440244..1440900 (-) | 657 | WP_000353149.1 | ABC transporter ATP-binding protein | - |
| DQL56_RS07500 (NCTC11930_01487) | - | 1440910..1442187 (-) | 1278 | WP_000594360.1 | ABC transporter permease | - |
| DQL56_RS07505 | - | 1442929..1443090 (+) | 162 | WP_000508795.1 | TM2 domain-containing protein | - |
| DQL56_RS11055 | - | 1443263..1444640 (-) | 1378 | Protein_1397 | IS3 family transposase | - |
| DQL56_RS07530 (NCTC11930_01491) | - | 1444646..1444912 (+) | 267 | WP_001872365.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 62 a.a. Molecular weight: 7180.25 Da Isoelectric Point: 4.7815
>NTDB_id=1137540 DQL56_RS07465 WP_000027835.1 1435495..1435683(-) (prx) [Streptococcus agalactiae strain NCTC11930]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
Nucleotide
Download Length: 189 bp
>NTDB_id=1137540 DQL56_RS07465 WP_000027835.1 1435495..1435683(-) (prx) [Streptococcus agalactiae strain NCTC11930]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| prx | Streptococcus pyogenes MGAS315 |
72.222 |
87.097 |
0.629 |
| prx | Streptococcus pyogenes MGAS8232 |
69.091 |
88.71 |
0.613 |
| prx | Streptococcus pyogenes MGAS315 |
66.667 |
87.097 |
0.581 |
| prx | Streptococcus pyogenes MGAS315 |
85 |
64.516 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
61.818 |
88.71 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
74.359 |
62.903 |
0.468 |
| prx | Streptococcus pyogenes MGAS315 |
78.378 |
59.677 |
0.468 |