Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | DQL34_RS01765 | Genome accession | NZ_LS483339 |
| Coordinates | 326489..327388 (+) | Length | 299 a.a. |
| NCBI ID | WP_111679231.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain NCTC12958 | ||
| Function | activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 321489..332388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL34_RS01745 (NCTC12958_00372) | trkA | 322626..323975 (-) | 1350 | WP_024704181.1 | Trk system potassium transporter TrkA | - |
| DQL34_RS01750 (NCTC12958_00374) | - | 324234..324773 (+) | 540 | WP_372585740.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| DQL34_RS01755 (NCTC12958_00376) | - | 325084..325641 (+) | 558 | WP_111679227.1 | ECF transporter S component | - |
| DQL34_RS01760 (NCTC12958_00377) | - | 325644..326294 (+) | 651 | WP_111679229.1 | phosphatase PAP2 family protein | - |
| DQL34_RS01765 (NCTC12958_00378) | comR | 326489..327388 (+) | 900 | WP_111679231.1 | helix-turn-helix domain-containing protein | Regulator |
| DQL34_RS12315 | - | 327626..327922 (+) | 297 | Protein_302 | cysteine peptidase family C39 domain-containing protein | - |
| DQL34_RS12320 | comA | 328088..328483 (+) | 396 | WP_252989162.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| DQL34_RS12325 (NCTC12958_00381) | comA | 328567..329037 (+) | 471 | WP_111679233.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| DQL34_RS01780 (NCTC12958_00382) | comA | 329092..329661 (+) | 570 | WP_231907528.1 | ATP-binding cassette domain-containing protein | Regulator |
| DQL34_RS01785 (NCTC12958_00383) | - | 329791..330099 (+) | 309 | WP_223899647.1 | DUF805 domain-containing protein | - |
| DQL34_RS11765 | - | 330245..330724 (-) | 480 | WP_223899648.1 | DUF4153 domain-containing protein | - |
| DQL34_RS11770 (NCTC12958_00384) | - | 331165..331536 (-) | 372 | WP_223899649.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 299 a.a. Molecular weight: 35312.78 Da Isoelectric Point: 5.1031
>NTDB_id=1137344 DQL34_RS01765 WP_111679231.1 326489..327388(+) (comR) [Streptococcus thermophilus strain NCTC12958]
MNIKDSIGLRIKTEREHQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALVVIEKS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
MNIKDSIGLRIKTEREHQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALVVIEKS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
Nucleotide
Download Length: 900 bp
>NTDB_id=1137344 DQL34_RS01765 WP_111679231.1 326489..327388(+) (comR) [Streptococcus thermophilus strain NCTC12958]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACACCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GTTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGCAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGTTGTCATAGAAAAATCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACACCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GTTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGCAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGTTGTCATAGAAAAATCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus thermophilus LMG 18311 |
99.331 |
100 |
0.993 |
| comR | Streptococcus thermophilus LMD-9 |
98.662 |
100 |
0.987 |
| comR | Streptococcus salivarius strain HSISS4 |
94.649 |
100 |
0.946 |
| comR | Streptococcus salivarius SK126 |
94.314 |
100 |
0.943 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
42.14 |
100 |
0.421 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
41.806 |
100 |
0.418 |