Detailed information NTG1137396

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: DQL34_RS12325
• Genome accession: NZ_LS483339
• Coordinates: 328567..329037 (+)
• Length: 156 a.a.
• NCBI ID: WP_111679233.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain NCTC12958
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 323567..334037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL34_RS01750 (NCTC12958_00374)	-	324234..324773 (+)	540	WP_372585740.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
DQL34_RS01755 (NCTC12958_00376)	-	325084..325641 (+)	558	WP_111679227.1	ECF transporter S component	-
DQL34_RS01760 (NCTC12958_00377)	-	325644..326294 (+)	651	WP_111679229.1	phosphatase PAP2 family protein	-
DQL34_RS01765 (NCTC12958_00378)	comR	326489..327388 (+)	900	WP_111679231.1	helix-turn-helix domain-containing protein	Regulator
DQL34_RS12315	-	327626..327922 (+)	297	Protein_302	cysteine peptidase family C39 domain-containing protein	-
DQL34_RS12320	comA	328088..328483 (+)	396	WP_252989162.1	ABC transporter transmembrane domain-containing protein	Regulator
DQL34_RS12325 (NCTC12958_00381)	comA	328567..329037 (+)	471	WP_111679233.1	ABC transporter transmembrane domain-containing protein	Regulator
DQL34_RS01780 (NCTC12958_00382)	comA	329092..329661 (+)	570	WP_231907528.1	ATP-binding cassette domain-containing protein	Regulator
DQL34_RS01785 (NCTC12958_00383)	-	329791..330099 (+)	309	WP_223899647.1	DUF805 domain-containing protein	-
DQL34_RS11765	-	330245..330724 (-)	480	WP_223899648.1	DUF4153 domain-containing protein	-
DQL34_RS11770 (NCTC12958_00384)	-	331165..331536 (-)	372	WP_223899649.1	hypothetical protein	-
DQL34_RS01805 (NCTC12958_00385)	-	331940..332455 (+)	516	WP_111679235.1	AmiS/UreI family transporter	-
DQL34_RS01810 (NCTC12958_00386)	-	332480..332782 (+)	303	WP_002886558.1	urease subunit gamma	-
DQL34_RS01815 (NCTC12958_00387)	-	332794..333105 (+)	312	WP_111679237.1	urease subunit beta	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 18033.90 Da
• Isoelectric Point: 9.6931

>NTDB_id=1137396 DQL34_RS12325 WP_111679233.1 328567..329037(+) (comA) [Streptococcus thermophilus strain NCTC12958]
MEANSQVNTAVIDDLRGIETLKSLRVEERRYREIEVKFHDYLKKSLSKAKWQLTQDGLKTVVQLVSNVFILWYGGQLVME
GQLSAGQLITYNMLLNYFTTPLINIINLQSKIQQAKVANNCLQEVYVVDKEEKGKLKELSFKQLAFKGVSHRFSYQ

Nucleotide

• Length: 471 bp

>NTDB_id=1137396 DQL34_RS12325 WP_111679233.1 328567..329037(+) (comA) [Streptococcus thermophilus strain NCTC12958]
ATGGAGGCAAATAGTCAGGTCAATACCGCTGTTATTGATGATTTGCGAGGTATTGAAACCTTAAAATCCTTGAGGGTTGA
GGAAAGACGCTATCGAGAAATTGAGGTGAAATTCCATGACTATTTGAAGAAGTCTTTGTCTAAGGCCAAGTGGCAATTAA
CGCAGGATGGGTTAAAGACAGTGGTTCAGTTAGTTTCTAATGTCTTTATCCTCTGGTATGGGGGACAATTGGTCATGGAA
GGGCAACTATCTGCAGGTCAGTTGATTACCTATAATATGTTGTTGAATTATTTTACAACTCCTTTAATTAATATCATCAA
TCTCCAATCTAAAATTCAGCAAGCCAAAGTCGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGGACAAGGAAGAAAAAG
GAAAACTTAAAGAGTTATCTTTTAAACAACTTGCTTTTAAAGGAGTCAGTCACCGTTTTAGTTATCAGTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (1-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	51.572	100	0.526
comA	Streptococcus mitis SK321	50.943	100	0.519
comA	Streptococcus pneumoniae TIGR4	50.943	100	0.519
comA	Streptococcus pneumoniae Rx1	50.943	100	0.519
comA	Streptococcus pneumoniae D39	50.943	100	0.519
comA	Streptococcus pneumoniae R6	50.943	100	0.519
comA	Streptococcus gordonii str. Challis substr. CH1	50.943	100	0.519
comA/nlmT	Streptococcus mutans UA159	46.541	100	0.474