Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL03_RS07380 Genome accession   NZ_LS483337
Coordinates   1461873..1462052 (-) Length   59 a.a.
NCBI ID   WP_038432505.1    Uniprot ID   A0A8B6IX98
Organism   Streptococcus pyogenes strain NCTC12047     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1456873..1467052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL03_RS07360 (NCTC12047_01457) - 1457720..1458379 (+) 660 WP_014635687.1 Crp/Fnr family transcriptional regulator -
  DQL03_RS07365 (NCTC12047_01458) - 1458401..1460683 (+) 2283 WP_002983029.1 Xaa-Pro dipeptidyl-peptidase -
  DQL03_RS07370 (NCTC12047_01459) - 1460763..1460984 (-) 222 WP_002988211.1 helix-turn-helix domain-containing protein -
  DQL03_RS07375 (NCTC12047_01460) - 1461154..1461528 (+) 375 WP_002988207.1 helix-turn-helix domain-containing protein -
  DQL03_RS07380 (NCTC12047_01461) prx 1461873..1462052 (-) 180 WP_038432505.1 hypothetical protein Regulator
  DQL03_RS07385 (NCTC12047_01462) sda3 1462290..1463090 (+) 801 WP_011285611.1 streptodornase Sda3 -
  DQL03_RS07390 (NCTC12047_01463) - 1463470..1463796 (+) 327 WP_012560945.1 hypothetical protein -
  DQL03_RS07395 (NCTC12047_01464) - 1463846..1464712 (-) 867 WP_011888701.1 DUF334 domain-containing protein -
  DQL03_RS07400 (NCTC12047_01465) - 1464700..1465224 (-) 525 WP_012560947.1 Panacea domain-containing protein -
  DQL03_RS07405 (NCTC12047_01466) - 1465364..1466572 (-) 1209 WP_012560948.1 glucosaminidase domain-containing protein -
  DQL03_RS07410 (NCTC12047_01468) - 1466688..1466915 (-) 228 WP_011017843.1 phage holin -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6792.86 Da        Isoelectric Point: 4.0650

>NTDB_id=1137268 DQL03_RS07380 WP_038432505.1 1461873..1462052(-) (prx) [Streptococcus pyogenes strain NCTC12047]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVLMELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1137268 DQL03_RS07380 WP_038432505.1 1461873..1462052(-) (prx) [Streptococcus pyogenes strain NCTC12047]
ATGCTAACATACGACGAGTTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGCTAATGGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

90.476

71.186

0.644
  prx Streptococcus pyogenes MGAS315

85.366

69.492

0.593
  prx Streptococcus pyogenes MGAS315

75.61

69.492

0.525

Multiple sequence alignment