Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL08_RS07970 Genome accession   NZ_LS483336
Coordinates   1557332..1557514 (-) Length   60 a.a.
NCBI ID   WP_023611749.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12046     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1552332..1562514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL08_RS07965 (NCTC12046_01584) - 1555856..1556930 (-) 1075 Protein_1474 glycerate kinase -
  DQL08_RS07970 (NCTC12046_01586) prx 1557332..1557514 (-) 183 WP_023611749.1 hypothetical protein Regulator
  DQL08_RS07975 (NCTC12046_01587) - 1557719..1557958 (+) 240 WP_003055856.1 hypothetical protein -
  DQL08_RS07980 (NCTC12046_01588) - 1557997..1558470 (+) 474 WP_003055874.1 hypothetical protein -
  DQL08_RS07985 (NCTC12046_01589) - 1558472..1558828 (+) 357 WP_003055891.1 hypothetical protein -
  DQL08_RS07990 (NCTC12046_01590) acrIIA3 1558961..1559335 (+) 375 WP_023611744.1 anti-CRISPR protein AcrIIA3 -
  DQL08_RS07995 (NCTC12046_01591) - 1559335..1559937 (+) 603 WP_023611748.1 AP endonuclease -
  DQL08_RS08000 (NCTC12046_01592) - 1559939..1560154 (+) 216 WP_023611751.1 hypothetical protein -
  DQL08_RS08005 (NCTC12046_01593) - 1560223..1560462 (+) 240 WP_003055855.1 hypothetical protein -
  DQL08_RS08010 (NCTC12046_01594) - 1560649..1561851 (-) 1203 WP_023611747.1 glucosaminidase domain-containing protein -
  DQL08_RS08015 (NCTC12046_01595) - 1561967..1562194 (-) 228 WP_000609113.1 phage holin -
  DQL08_RS08020 (NCTC12046_01596) - 1562191..1562466 (-) 276 WP_002987582.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6834.77 Da        Isoelectric Point: 4.1954

>NTDB_id=1137213 DQL08_RS07970 WP_023611749.1 1557332..1557514(-) (prx) [Streptococcus pyogenes strain NCTC12046]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRSGEVVTEEKVEAVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1137213 DQL08_RS07970 WP_023611749.1 1557332..1557514(-) (prx) [Streptococcus pyogenes strain NCTC12046]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGATCGGGGGAGGTTGTGACAGAGGAGAAGGTGGAAGCAG
TGCTGAGGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS8232

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

73.81

70

0.517

Multiple sequence alignment