Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQL08_RS01510 Genome accession   NZ_LS483336
Coordinates   276575..277126 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12046     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 271575..282126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL08_RS01510 (NCTC12046_00298) comX/sigX/comX2/sigX2 276575..277126 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DQL08_RS01515 (NCTC12046_00299) - 277707..278234 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQL08_RS01520 (NCTC12046_00300) yqeH 278234..279352 (+) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  DQL08_RS01525 (NCTC12046_00301) yhbY 279378..279686 (+) 309 WP_111687942.1 ribosome assembly RNA-binding protein YhbY -
  DQL08_RS01530 (NCTC12046_00302) - 279755..280387 (+) 633 WP_063662070.1 nicotinate-nucleotide adenylyltransferase -
  DQL08_RS01535 (NCTC12046_00303) yqeK 280384..280977 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQL08_RS01540 (NCTC12046_00304) rsfS 281001..281354 (+) 354 WP_011017339.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1137183 DQL08_RS01510 WP_010921894.1 276575..277126(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC12046]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1137183 DQL08_RS01510 WP_010921894.1 276575..277126(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC12046]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTTCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.