Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQL25_RS02015 Genome accession   NZ_LS483330
Coordinates   373093..373275 (+) Length   60 a.a.
NCBI ID   WP_047149504.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8328     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 368093..378275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL25_RS01990 (NCTC8328_00397) - 369491..369919 (+) 429 WP_002988448.1 DUF1617 family protein -
  DQL25_RS01995 (NCTC8328_00398) - 369922..370560 (+) 639 WP_046735270.1 hypothetical protein -
  DQL25_RS02000 (NCTC8328_00399) - 370572..370844 (+) 273 WP_011017397.1 hypothetical protein -
  DQL25_RS02005 (NCTC8328_00400) - 370841..371068 (+) 228 WP_029714020.1 phage holin -
  DQL25_RS02010 (NCTC8328_00402) - 371191..372396 (+) 1206 WP_047149505.1 glucosaminidase domain-containing protein -
  DQL25_RS02015 (NCTC8328_00404) prx 373093..373275 (+) 183 WP_047149504.1 hypothetical protein Regulator
  DQL25_RS02020 (NCTC8328_00405) uvrA 373502..376330 (+) 2829 WP_011054967.1 excinuclease ABC subunit UvrA -
  DQL25_RS02025 (NCTC8328_00406) - 376446..377519 (+) 1074 WP_032460474.1 M24 family metallopeptidase -
  DQL25_RS02030 (NCTC8328_00407) - 377554..378015 (+) 462 WP_002988493.1 deoxycytidylate deaminase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6865.91 Da        Isoelectric Point: 3.9764

>NTDB_id=1136846 DQL25_RS02015 WP_047149504.1 373093..373275(+) (prx) [Streptococcus pyogenes strain NCTC8328]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1136846 DQL25_RS02015 WP_047149504.1 373093..373275(+) (prx) [Streptococcus pyogenes strain NCTC8328]
ATGCTAACATACGACGAGTTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517


Multiple sequence alignment