Detailed information NTG1136759

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQL47_RS08425
• Genome accession: NZ_LS483328
• Coordinates: 1759873..1760463 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC12090
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1754873..1765463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL47_RS08390 (NCTC12090_01695)	rsmI	1755225..1756091 (-)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
DQL47_RS08395 (NCTC12090_01696)	yabA	1756096..1756419 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
DQL47_RS08400 (NCTC12090_01697)	ricT	1756412..1757212 (-)	801	WP_012516196.1	regulatory iron-sulfur-containing complex subunit RicT	-
DQL47_RS08405 (NCTC12090_01698)	-	1757209..1758084 (-)	876	WP_111690375.1	DNA polymerase III subunit delta'	-
DQL47_RS08410 (NCTC12090_01699)	tmk	1758098..1758733 (-)	636	WP_043026483.1	dTMP kinase	-
DQL47_RS08415 (NCTC12090_01700)	-	1759047..1759331 (-)	285	WP_012677457.1	YlbG family protein	-
DQL47_RS08420 (NCTC12090_01701)	-	1759332..1759778 (-)	447	WP_043030100.1	YlbF family regulator	-
DQL47_RS08425 (NCTC12090_01702)	clpP	1759873..1760463 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQL47_RS08430 (NCTC12090_01703)	upp	1760695..1761324 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
DQL47_RS08435 (NCTC12090_01704)	-	1761474..1763105 (-)	1632	WP_111690376.1	polysaccharide biosynthesis protein	-
DQL47_RS08440 (NCTC12090_01705)	-	1763191..1764636 (+)	1446	WP_111690377.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=1136759 DQL47_RS08425 WP_012677455.1 1759873..1760463(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=1136759 DQL47_RS08425 WP_012677455.1 1759873..1760463(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566